Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU211159 |
| length | 882 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 3 |
| gene id | G178398 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 8711177 ~ 8712118 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210961 | lncRNA | downstream | 117772 | 8593186 ~ 8593405 (-) | True | G178227 |
| TU210939 | lncRNA | downstream | 189092 | 8521801 ~ 8522085 (-) | True | G178208 |
| TU210754 | lncRNA | downstream | 387013 | 8323619 ~ 8324164 (-) | True | G178057 |
| XR_003403692.2 | lncRNA | downstream | 435817 | 8271107 ~ 8275360 (-) | True | LOC113536653 |
| TU210491 | lncRNA | downstream | 784119 | 7926293 ~ 7927058 (-) | True | G177807 |
| TU211259 | lncRNA | upstream | 271100 | 8983218 ~ 8984148 (-) | False | asb7 |
| TU211271 | lncRNA | upstream | 291526 | 9003644 ~ 9003852 (-) | True | G178501 |
| TU211458 | lncRNA | upstream | 474953 | 9187071 ~ 9189914 (-) | True | G178673 |
| TU211464 | lncRNA | upstream | 485482 | 9197600 ~ 9197805 (-) | True | G178679 |
| TU211667 | lncRNA | upstream | 598106 | 9310224 ~ 9311903 (-) | True | G178867 |
| XM_026930526.2 | mRNA | downstream | 98871 | 8596180 ~ 8612306 (-) | True | plekho2 |
| XM_026930613.2 | mRNA | downstream | 121825 | 8572475 ~ 8589352 (-) | False | ankdd1a |
| XM_026930614.2 | mRNA | downstream | 121825 | 8572475 ~ 8589352 (-) | True | ankdd1a |
| XM_026930546.2 | mRNA | downstream | 146270 | 8550368 ~ 8564907 (-) | True | clpxa |
| XM_026930411.2 | mRNA | upstream | 95469 | 8807587 ~ 8924385 (-) | True | lrrk1 |
| XM_026930283.2 | mRNA | upstream | 214694 | 8926812 ~ 8950809 (-) | True | aldh1a3 |
| XM_026930818.2 | mRNA | upstream | 271064 | 8983182 ~ 8995113 (-) | False | asb7 |
| XM_026930819.2 | mRNA | upstream | 271064 | 8983182 ~ 8994947 (-) | True | asb7 |
| XM_026930820.2 | mRNA | upstream | 277044 | 8989162 ~ 8995120 (-) | False | asb7 |
| trnar-acg_8 | other | downstream | 463415 | 8247690 ~ 8247762 (-) | True | trnar-acg_8 |
| trnar-acg_7 | other | downstream | 464402 | 8246703 ~ 8246775 (-) | True | trnar-acg_7 |
| trnar-ucg_7 | other | downstream | 466456 | 8244649 ~ 8244721 (-) | True | trnar-ucg_7 |
| trnar-acg_5 | other | downstream | 468374 | 8242731 ~ 8242803 (-) | True | trnar-acg_5 |
| trnar-acg_4 | other | downstream | 468999 | 8242106 ~ 8242178 (-) | True | trnar-acg_4 |
| trnae-uuc_3 | other | upstream | 178509 | 8890627 ~ 8890698 (-) | True | trnae-uuc_3 |
| TU211757 | other | upstream | 810298 | 9522416 ~ 9523330 (-) | True | G178942 |
| TU211855 | other | upstream | 1101774 | 9813892 ~ 9815225 (-) | True | G179035 |
| TU212647 | other | upstream | 2531857 | 11243975 ~ 11246305 (-) | False | nppc |
| TU212749 | other | upstream | 2696974 | 11409092 ~ 11415440 (-) | False | G179803 |
