Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU211320 |
| length | 222 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G178539 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 9205457 ~ 9205678 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU211134 | lncRNA | upstream | 221215 | 8982965 ~ 8984242 (+) | True | G178383 |
| TU211135 | lncRNA | upstream | 221215 | 8983551 ~ 8984242 (+) | False | G178383 |
| TU210999 | lncRNA | upstream | 396513 | 8807605 ~ 8808944 (+) | True | G178260 |
| TU210915 | lncRNA | upstream | 615902 | 8588820 ~ 8589555 (+) | True | G178192 |
| TU210887 | lncRNA | upstream | 660982 | 8544269 ~ 8544475 (+) | True | G178170 |
| TU211525 | lncRNA | downstream | 71927 | 9277605 ~ 9277816 (+) | True | G178740 |
| TU211526 | lncRNA | downstream | 72209 | 9277887 ~ 9278116 (+) | True | G178741 |
| TU211546 | lncRNA | downstream | 93708 | 9299386 ~ 9299657 (+) | True | G178761 |
| TU211545 | lncRNA | downstream | 95316 | 9300994 ~ 9301338 (+) | True | G178760 |
| TU211550 | lncRNA | downstream | 103639 | 9309317 ~ 9310183 (+) | True | G178764 |
| XM_034308734.1 | mRNA | upstream | 15538 | 9039210 ~ 9189919 (+) | True | adamts17 |
| XM_034308735.1 | mRNA | upstream | 15538 | 9039211 ~ 9189919 (+) | False | adamts17 |
| XM_034308952.1 | mRNA | upstream | 170003 | 9007369 ~ 9035454 (+) | False | cers3a |
| XM_026930620.2 | mRNA | upstream | 170005 | 9007373 ~ 9035452 (+) | True | cers3a |
| XM_026930621.2 | mRNA | upstream | 170005 | 9007375 ~ 9035452 (+) | False | cers3a |
| XM_026930378.2 | mRNA | downstream | 20769 | 9226447 ~ 9257997 (+) | True | minar1 |
| XM_034308656.1 | mRNA | downstream | 130969 | 9336647 ~ 9349909 (+) | False | zfand6 |
| XM_034308655.1 | mRNA | downstream | 131082 | 9336760 ~ 9349909 (+) | False | zfand6 |
| XM_026930698.2 | mRNA | downstream | 131862 | 9337540 ~ 9349909 (+) | True | zfand6 |
| XM_026930827.2 | mRNA | downstream | 144518 | 9350196 ~ 9378551 (+) | True | fah |
| TU210703 | other | upstream | 934708 | 8253421 ~ 8270749 (+) | True | LOC113536578 |
| TU210704 | other | upstream | 934708 | 8255867 ~ 8270749 (+) | False | LOC113536578 |
| trnar-ucg_8 | other | upstream | 957369 | 8248016 ~ 8248088 (+) | True | trnar-ucg_8 |
| trnar-acg_6 | other | upstream | 960433 | 8244952 ~ 8245024 (+) | True | trnar-acg_6 |
| trnar-ucg_6 | other | upstream | 961963 | 8243422 ~ 8243494 (+) | False | trnar-ucg_6 |
| TU212529 | other | downstream | 1890475 | 11096153 ~ 11098811 (+) | True | G179632 |
| TU212546 | other | downstream | 1954668 | 11160346 ~ 11161125 (+) | False | G179643 |
| TU212545 | other | downstream | 1954708 | 11160386 ~ 11161597 (+) | True | G179643 |
| TU212547 | other | downstream | 1954708 | 11160386 ~ 11161217 (+) | False | G179643 |
| XR_003403700.1 | other | downstream | 2206382 | 11412060 ~ 11412127 (+) | True | LOC113536790 |
