Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU211668 |
| length | 797 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G178868 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 9312854 ~ 9313650 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU211667 | lncRNA | downstream | 951 | 9310224 ~ 9311903 (-) | True | G178867 |
| TU211464 | lncRNA | downstream | 115049 | 9197600 ~ 9197805 (-) | True | G178679 |
| TU211458 | lncRNA | downstream | 122940 | 9187071 ~ 9189914 (-) | True | G178673 |
| TU211271 | lncRNA | downstream | 309002 | 9003644 ~ 9003852 (-) | True | G178501 |
| TU211259 | lncRNA | downstream | 328706 | 8983218 ~ 8984148 (-) | False | asb7 |
| TU211661 | lncRNA | upstream | 7414 | 9321064 ~ 9336136 (-) | False | mthfs |
| TU211709 | lncRNA | upstream | 73857 | 9387507 ~ 9407218 (-) | False | LOC113536412 |
| TU211728 | lncRNA | upstream | 127269 | 9440919 ~ 9443927 (-) | True | G178914 |
| TU211776 | lncRNA | upstream | 311634 | 9625284 ~ 9627183 (-) | True | G178961 |
| TU211823 | lncRNA | upstream | 425881 | 9739531 ~ 9754379 (-) | True | G179004 |
| XM_026930820.2 | mRNA | downstream | 317734 | 8989162 ~ 8995120 (-) | False | asb7 |
| XM_026930818.2 | mRNA | downstream | 317741 | 8983182 ~ 8995113 (-) | False | asb7 |
| XM_026930819.2 | mRNA | downstream | 317907 | 8983182 ~ 8994947 (-) | True | asb7 |
| XM_026930283.2 | mRNA | downstream | 362045 | 8926812 ~ 8950809 (-) | True | aldh1a3 |
| XM_026930411.2 | mRNA | downstream | 388469 | 8807587 ~ 8924385 (-) | True | lrrk1 |
| XM_026930805.2 | mRNA | upstream | 7316 | 9320966 ~ 9336186 (-) | True | mthfs |
| XM_026930299.2 | mRNA | upstream | 73841 | 9387491 ~ 9407193 (-) | False | LOC113536412 |
| XM_034308446.1 | mRNA | upstream | 73841 | 9387491 ~ 9406551 (-) | False | LOC113536412 |
| XM_034308447.1 | mRNA | upstream | 73841 | 9387491 ~ 9393193 (-) | True | LOC113536412 |
| XM_026930355.2 | mRNA | upstream | 445002 | 9758652 ~ 9768100 (-) | True | mesd |
| trnae-uuc_3 | other | downstream | 422156 | 8890627 ~ 8890698 (-) | True | trnae-uuc_3 |
| trnar-acg_8 | other | downstream | 1065092 | 8247690 ~ 8247762 (-) | True | trnar-acg_8 |
| trnar-acg_7 | other | downstream | 1066079 | 8246703 ~ 8246775 (-) | True | trnar-acg_7 |
| trnar-ucg_7 | other | downstream | 1068133 | 8244649 ~ 8244721 (-) | True | trnar-ucg_7 |
| trnar-acg_5 | other | downstream | 1070051 | 8242731 ~ 8242803 (-) | True | trnar-acg_5 |
| TU211757 | other | upstream | 208766 | 9522416 ~ 9523330 (-) | True | G178942 |
| TU211855 | other | upstream | 500242 | 9813892 ~ 9815225 (-) | True | G179035 |
| TU212647 | other | upstream | 1930325 | 11243975 ~ 11246305 (-) | False | nppc |
| TU212749 | other | upstream | 2095442 | 11409092 ~ 11415440 (-) | False | G179803 |
| TU212758 | other | upstream | 2182424 | 11496074 ~ 11503962 (-) | False | LOC117598430 |
