Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU211757 |
| length | 411 |
| RNA type | TUCP |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G178942 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 9522416 ~ 9523330 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU211728 | lncRNA | downstream | 78489 | 9440919 ~ 9443927 (-) | True | G178914 |
| TU211709 | lncRNA | downstream | 115198 | 9387507 ~ 9407218 (-) | False | LOC113536412 |
| TU211661 | lncRNA | downstream | 186280 | 9321064 ~ 9336136 (-) | False | mthfs |
| TU211668 | lncRNA | downstream | 208766 | 9312854 ~ 9313650 (-) | True | G178868 |
| TU211667 | lncRNA | downstream | 210513 | 9310224 ~ 9311903 (-) | True | G178867 |
| TU211776 | lncRNA | upstream | 101954 | 9625284 ~ 9627183 (-) | True | G178961 |
| TU211823 | lncRNA | upstream | 216201 | 9739531 ~ 9754379 (-) | True | G179004 |
| TU211840 | lncRNA | upstream | 247488 | 9770818 ~ 9774409 (-) | True | G179021 |
| TU212223 | lncRNA | upstream | 588698 | 10112028 ~ 10112242 (-) | True | G179372 |
| TU212321 | lncRNA | upstream | 963535 | 10486865 ~ 10487943 (-) | False | sh3gl3a |
| XM_026930299.2 | mRNA | downstream | 115223 | 9387491 ~ 9407193 (-) | False | LOC113536412 |
| XM_034308446.1 | mRNA | downstream | 115865 | 9387491 ~ 9406551 (-) | False | LOC113536412 |
| XM_034308447.1 | mRNA | downstream | 129223 | 9387491 ~ 9393193 (-) | True | LOC113536412 |
| XM_026930805.2 | mRNA | downstream | 186230 | 9320966 ~ 9336186 (-) | True | mthfs |
| XM_026930820.2 | mRNA | downstream | 527296 | 8989162 ~ 8995120 (-) | False | asb7 |
| XM_026930355.2 | mRNA | upstream | 235322 | 9758652 ~ 9768100 (-) | True | mesd |
| XM_026930358.2 | mRNA | upstream | 304618 | 9827948 ~ 9835960 (-) | True | stard5 |
| XM_026930381.2 | mRNA | upstream | 314669 | 9837999 ~ 9864785 (-) | False | LOC113536465 |
| XM_026930380.2 | mRNA | upstream | 314669 | 9837999 ~ 9864785 (-) | False | LOC113536465 |
| XM_026930379.2 | mRNA | upstream | 314669 | 9837999 ~ 9864785 (-) | True | LOC113536465 |
| trnae-uuc_3 | other | downstream | 631718 | 8890627 ~ 8890698 (-) | True | trnae-uuc_3 |
| trnar-acg_8 | other | downstream | 1274654 | 8247690 ~ 8247762 (-) | True | trnar-acg_8 |
| trnar-acg_7 | other | downstream | 1275641 | 8246703 ~ 8246775 (-) | True | trnar-acg_7 |
| trnar-ucg_7 | other | downstream | 1277695 | 8244649 ~ 8244721 (-) | True | trnar-ucg_7 |
| trnar-acg_5 | other | downstream | 1279613 | 8242731 ~ 8242803 (-) | True | trnar-acg_5 |
| TU211855 | other | upstream | 290562 | 9813892 ~ 9815225 (-) | True | G179035 |
| TU212647 | other | upstream | 1720645 | 11243975 ~ 11246305 (-) | False | nppc |
| TU212749 | other | upstream | 1885762 | 11409092 ~ 11415440 (-) | False | G179803 |
| TU212758 | other | upstream | 1972744 | 11496074 ~ 11503962 (-) | False | LOC117598430 |
| TU213621 | other | upstream | 3194031 | 12717361 ~ 12720476 (-) | True | G180485 |
