Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU211855 |
| length | 1193 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G179035 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 9813892 ~ 9815225 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU211840 | lncRNA | downstream | 39483 | 9770818 ~ 9774409 (-) | True | G179021 |
| TU211823 | lncRNA | downstream | 59513 | 9739531 ~ 9754379 (-) | True | G179004 |
| TU211776 | lncRNA | downstream | 186709 | 9625284 ~ 9627183 (-) | True | G178961 |
| TU211728 | lncRNA | downstream | 369965 | 9440919 ~ 9443927 (-) | True | G178914 |
| TU211709 | lncRNA | downstream | 406674 | 9387507 ~ 9407218 (-) | False | LOC113536412 |
| TU212223 | lncRNA | upstream | 296803 | 10112028 ~ 10112242 (-) | True | G179372 |
| TU212321 | lncRNA | upstream | 671640 | 10486865 ~ 10487943 (-) | False | sh3gl3a |
| TU212324 | lncRNA | upstream | 696396 | 10511621 ~ 10512024 (-) | True | G179466 |
| TU212327 | lncRNA | upstream | 699471 | 10514696 ~ 10515201 (-) | True | G179469 |
| TU212342 | lncRNA | upstream | 746178 | 10561403 ~ 10563452 (-) | True | G179478 |
| XM_026930355.2 | mRNA | downstream | 45792 | 9758652 ~ 9768100 (-) | True | mesd |
| XM_026930299.2 | mRNA | downstream | 406699 | 9387491 ~ 9407193 (-) | False | LOC113536412 |
| XM_034308446.1 | mRNA | downstream | 407341 | 9387491 ~ 9406551 (-) | False | LOC113536412 |
| XM_034308447.1 | mRNA | downstream | 420699 | 9387491 ~ 9393193 (-) | True | LOC113536412 |
| XM_026930805.2 | mRNA | downstream | 477706 | 9320966 ~ 9336186 (-) | True | mthfs |
| XM_026930358.2 | mRNA | upstream | 12723 | 9827948 ~ 9835960 (-) | True | stard5 |
| XM_026930381.2 | mRNA | upstream | 22774 | 9837999 ~ 9864785 (-) | False | LOC113536465 |
| XM_026930380.2 | mRNA | upstream | 22774 | 9837999 ~ 9864785 (-) | False | LOC113536465 |
| XM_026930379.2 | mRNA | upstream | 22774 | 9837999 ~ 9864785 (-) | True | LOC113536465 |
| XM_034308511.1 | mRNA | upstream | 22774 | 9837999 ~ 9858507 (-) | False | LOC113536465 |
| TU211757 | other | downstream | 290562 | 9522416 ~ 9523330 (-) | True | G178942 |
| trnae-uuc_3 | other | downstream | 923194 | 8890627 ~ 8890698 (-) | True | trnae-uuc_3 |
| trnar-acg_8 | other | downstream | 1566130 | 8247690 ~ 8247762 (-) | True | trnar-acg_8 |
| trnar-acg_7 | other | downstream | 1567117 | 8246703 ~ 8246775 (-) | True | trnar-acg_7 |
| trnar-ucg_7 | other | downstream | 1569171 | 8244649 ~ 8244721 (-) | True | trnar-ucg_7 |
| TU212647 | other | upstream | 1428750 | 11243975 ~ 11246305 (-) | False | nppc |
| TU212749 | other | upstream | 1593867 | 11409092 ~ 11415440 (-) | False | G179803 |
| TU212758 | other | upstream | 1680849 | 11496074 ~ 11503962 (-) | False | LOC117598430 |
| TU213621 | other | upstream | 2902136 | 12717361 ~ 12720476 (-) | True | G180485 |
| trnam-cau_27 | other | upstream | 3421178 | 13236403 ~ 13236475 (-) | True | trnam-cau_27 |
