Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU212552 |
| length | 255 |
| lncRNA type | intronic |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G179647 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 11152018 ~ 11152956 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU212525 | lncRNA | upstream | 82201 | 11069589 ~ 11069817 (+) | True | G179628 |
| TU212457 | lncRNA | upstream | 288168 | 10863649 ~ 10863850 (+) | True | G179572 |
| TU212441 | lncRNA | upstream | 301153 | 10830324 ~ 10850865 (+) | False | LOC113536516 |
| TU212446 | lncRNA | upstream | 342747 | 10809036 ~ 10809271 (+) | True | G179561 |
| TU212443 | lncRNA | upstream | 346707 | 10805105 ~ 10805311 (+) | True | G179558 |
| TU212593 | lncRNA | downstream | 10065 | 11163021 ~ 11163379 (+) | True | G179685 |
| TU212604 | lncRNA | downstream | 41880 | 11194836 ~ 11195687 (+) | True | G179696 |
| TU212674 | lncRNA | downstream | 247968 | 11400924 ~ 11401434 (+) | True | G179754 |
| TU212671 | lncRNA | downstream | 251403 | 11404359 ~ 11407414 (+) | True | G179753 |
| TU212682 | lncRNA | downstream | 275657 | 11428613 ~ 11430897 (+) | True | G179758 |
| XM_026930494.2 | mRNA | upstream | 301095 | 10810670 ~ 10850923 (+) | True | LOC113536516 |
| XM_026930495.2 | mRNA | upstream | 301095 | 10810670 ~ 10850923 (+) | False | LOC113536516 |
| XM_026930894.2 | mRNA | upstream | 477966 | 10650258 ~ 10674052 (+) | True | LOC113536756 |
| XM_026930758.2 | mRNA | upstream | 528854 | 10617812 ~ 10623164 (+) | True | tctex1d2 |
| XM_034308893.1 | mRNA | upstream | 572625 | 10565259 ~ 10579393 (+) | True | rubcn |
| XM_026930852.2 | mRNA | downstream | 23141 | 11176097 ~ 11181854 (+) | True | b3gnt7 |
| XM_034308527.1 | mRNA | downstream | 208008 | 11360964 ~ 11379995 (+) | True | alpi.1 |
| XM_026930287.2 | mRNA | downstream | 231850 | 11384806 ~ 11392946 (+) | True | alpi.2 |
| XM_026930646.2 | mRNA | downstream | 242251 | 11395207 ~ 11402964 (+) | False | ppp1r2 |
| XM_026930645.2 | mRNA | downstream | 242252 | 11395208 ~ 11402963 (+) | True | ppp1r2 |
| TU212529 | other | upstream | 53207 | 11096153 ~ 11098811 (+) | True | G179632 |
| TU210703 | other | upstream | 2881269 | 8253421 ~ 8270749 (+) | True | LOC113536578 |
| TU210704 | other | upstream | 2881269 | 8255867 ~ 8270749 (+) | False | LOC113536578 |
| trnar-ucg_8 | other | upstream | 2903930 | 8248016 ~ 8248088 (+) | True | trnar-ucg_8 |
| trnar-acg_6 | other | upstream | 2906994 | 8244952 ~ 8245024 (+) | True | trnar-acg_6 |
| TU212546 | other | downstream | 7390 | 11160346 ~ 11161125 (+) | False | G179643 |
| TU212545 | other | downstream | 7430 | 11160386 ~ 11161597 (+) | True | G179643 |
| TU212547 | other | downstream | 7430 | 11160386 ~ 11161217 (+) | False | G179643 |
| XR_003403700.1 | other | downstream | 259104 | 11412060 ~ 11412127 (+) | True | LOC113536790 |
| XR_004579127.1 | other | downstream | 259618 | 11412574 ~ 11412640 (+) | True | LOC117598448 |
