Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU212682 |
| length | 710 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G179758 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 11428613 ~ 11430897 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU212671 | lncRNA | upstream | 21199 | 11404359 ~ 11407414 (+) | True | G179753 |
| TU212674 | lncRNA | upstream | 27179 | 11400924 ~ 11401434 (+) | True | G179754 |
| TU212604 | lncRNA | upstream | 232926 | 11194836 ~ 11195687 (+) | True | G179696 |
| TU212593 | lncRNA | upstream | 265234 | 11163021 ~ 11163379 (+) | True | G179685 |
| TU212553 | lncRNA | upstream | 273850 | 11152149 ~ 11154763 (+) | True | G179648 |
| TU212705 | lncRNA | downstream | 40449 | 11471346 ~ 11473207 (+) | True | G179773 |
| TU212710 | lncRNA | downstream | 42671 | 11473568 ~ 11475147 (+) | True | G179775 |
| TU212715 | lncRNA | downstream | 47451 | 11478348 ~ 11530003 (+) | True | G179779 |
| TU212723 | lncRNA | downstream | 85850 | 11516747 ~ 11518939 (+) | True | G179786 |
| TU212726 | lncRNA | downstream | 90906 | 11521803 ~ 11524359 (+) | True | G179787 |
| XM_034308807.1 | mRNA | upstream | 8796 | 11409068 ~ 11419817 (+) | True | ncl |
| XM_026930646.2 | mRNA | upstream | 25649 | 11395207 ~ 11402964 (+) | False | ppp1r2 |
| XM_026930645.2 | mRNA | upstream | 25650 | 11395208 ~ 11402963 (+) | True | ppp1r2 |
| XM_026930287.2 | mRNA | upstream | 35667 | 11384806 ~ 11392946 (+) | True | alpi.2 |
| XM_034308527.1 | mRNA | upstream | 48618 | 11360964 ~ 11379995 (+) | True | alpi.1 |
| XM_026930520.2 | mRNA | downstream | 16056 | 11446953 ~ 11457408 (+) | True | htr2b |
| XM_026930521.2 | mRNA | downstream | 16056 | 11446953 ~ 11457408 (+) | False | htr2b |
| XM_026930554.2 | mRNA | downstream | 120629 | 11551526 ~ 11562360 (+) | True | ttc14 |
| XM_026930536.2 | mRNA | downstream | 424722 | 11855619 ~ 11861835 (+) | True | dnajc19 |
| XM_034308815.1 | mRNA | downstream | 469499 | 11900396 ~ 11958703 (+) | True | atp11b |
| XR_003403710.1 | other | upstream | 10370 | 11418114 ~ 11418243 (+) | True | LOC113536800 |
| XR_004579127.1 | other | upstream | 15973 | 11412574 ~ 11412640 (+) | True | LOC117598448 |
| XR_003403700.1 | other | upstream | 16486 | 11412060 ~ 11412127 (+) | True | LOC113536790 |
| TU212545 | other | upstream | 267016 | 11160386 ~ 11161597 (+) | True | G179643 |
| TU212547 | other | upstream | 267396 | 11160386 ~ 11161217 (+) | False | G179643 |
| TU213106 | other | downstream | 624061 | 12054958 ~ 12055749 (+) | True | G180121 |
| TU213163 | other | downstream | 897169 | 12328066 ~ 12333631 (+) | False | timm13 |
| trnag-ucc_15 | other | downstream | 957273 | 12388170 ~ 12388241 (+) | True | trnag-ucc_15 |
| TU213294 | other | downstream | 1142296 | 12573193 ~ 12602064 (+) | False | LOC117598398 |
| TU213850 | other | downstream | 1665476 | 13096373 ~ 13098156 (+) | False | ankmy1 |
