Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU213194 |
| length | 540 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G180192 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 12392887 ~ 12393491 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU213141 | lncRNA | upstream | 205917 | 12181015 ~ 12186970 (+) | True | G180144 |
| TU213117 | lncRNA | upstream | 329977 | 12062559 ~ 12062910 (+) | True | G180132 |
| TU213107 | lncRNA | upstream | 339275 | 12053272 ~ 12053612 (+) | True | G180122 |
| XR_003403684.2 | lncRNA | upstream | 339737 | 12045804 ~ 12053150 (+) | True | LOC113536506 |
| XR_004579069.1 | lncRNA | upstream | 355431 | 12032000 ~ 12037456 (+) | True | LOC117598401 |
| TU213207 | lncRNA | downstream | 29211 | 12422702 ~ 12423152 (+) | True | G180205 |
| TU213255 | lncRNA | downstream | 93015 | 12486506 ~ 12486744 (+) | True | G180242 |
| TU213262 | lncRNA | downstream | 103240 | 12496731 ~ 12497651 (+) | True | G180246 |
| TU213271 | lncRNA | downstream | 150176 | 12543667 ~ 12561781 (+) | True | cdc14ab |
| TU213314 | lncRNA | downstream | 260305 | 12653796 ~ 12654215 (+) | True | G180267 |
| XM_026930463.2 | mRNA | upstream | 23110 | 12355995 ~ 12369777 (+) | False | sass6 |
| XM_026930462.2 | mRNA | upstream | 23110 | 12355997 ~ 12369777 (+) | True | sass6 |
| XM_026930478.2 | mRNA | upstream | 59206 | 12328052 ~ 12333681 (+) | True | timm13 |
| XM_026930449.2 | mRNA | upstream | 91977 | 12239232 ~ 12300910 (+) | True | arhgef18b |
| XM_026930452.2 | mRNA | upstream | 159068 | 12154268 ~ 12233819 (+) | True | insrb |
| XM_034308405.1 | mRNA | downstream | 80442 | 12473933 ~ 12479769 (+) | False | trmt13 |
| XM_026930503.2 | mRNA | downstream | 80444 | 12473935 ~ 12479769 (+) | True | trmt13 |
| XM_034308406.1 | mRNA | downstream | 90632 | 12484123 ~ 12487609 (+) | False | LOC113536408 |
| XM_026930294.2 | mRNA | downstream | 90632 | 12484123 ~ 12487609 (+) | False | LOC113536408 |
| XM_034308407.1 | mRNA | downstream | 92357 | 12485848 ~ 12487609 (+) | True | LOC113536408 |
| trnag-ucc_15 | other | upstream | 4646 | 12388170 ~ 12388241 (+) | True | trnag-ucc_15 |
| TU213163 | other | upstream | 59256 | 12328066 ~ 12333631 (+) | False | timm13 |
| TU213106 | other | upstream | 337138 | 12054958 ~ 12055749 (+) | True | G180121 |
| TU212683 | other | upstream | 963548 | 11428613 ~ 11429339 (+) | False | G179758 |
| XR_003403710.1 | other | upstream | 974644 | 11418114 ~ 11418243 (+) | True | LOC113536800 |
| TU213294 | other | downstream | 179702 | 12573193 ~ 12602064 (+) | False | LOC117598398 |
| TU213850 | other | downstream | 702882 | 13096373 ~ 13098156 (+) | False | ankmy1 |
| trnag-gcc_9 | other | downstream | 856879 | 13250370 ~ 13250441 (+) | True | trnag-gcc_9 |
| trnag-gcc_10 | other | downstream | 862566 | 13256057 ~ 13256124 (+) | True | trnag-gcc_10 |
| trnag-gcc_11 | other | downstream | 864517 | 13258008 ~ 13258076 (+) | True | trnag-gcc_11 |
