Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU213262 |
| length | 921 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G180246 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 12496731 ~ 12497651 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU213255 | lncRNA | upstream | 9987 | 12486506 ~ 12486744 (+) | True | G180242 |
| TU213207 | lncRNA | upstream | 73579 | 12422702 ~ 12423152 (+) | True | G180205 |
| TU213194 | lncRNA | upstream | 103240 | 12392887 ~ 12393491 (+) | True | G180192 |
| TU213141 | lncRNA | upstream | 309761 | 12181015 ~ 12186970 (+) | True | G180144 |
| TU213117 | lncRNA | upstream | 433821 | 12062559 ~ 12062910 (+) | True | G180132 |
| TU213271 | lncRNA | downstream | 46016 | 12543667 ~ 12561781 (+) | True | cdc14ab |
| TU213314 | lncRNA | downstream | 156145 | 12653796 ~ 12654215 (+) | True | G180267 |
| TU213315 | lncRNA | downstream | 156771 | 12654422 ~ 12682563 (+) | True | G180268 |
| TU213659 | lncRNA | downstream | 339217 | 12836868 ~ 12841282 (+) | True | G180516 |
| TU213678 | lncRNA | downstream | 353309 | 12850960 ~ 12851179 (+) | True | G180534 |
| XM_034308406.1 | mRNA | upstream | 9122 | 12484123 ~ 12487609 (+) | False | LOC113536408 |
| XM_026930294.2 | mRNA | upstream | 9122 | 12484123 ~ 12487609 (+) | False | LOC113536408 |
| XM_034308407.1 | mRNA | upstream | 9122 | 12485848 ~ 12487609 (+) | True | LOC113536408 |
| XM_034308405.1 | mRNA | upstream | 16962 | 12473933 ~ 12479769 (+) | False | trmt13 |
| XM_026930503.2 | mRNA | upstream | 16962 | 12473935 ~ 12479769 (+) | True | trmt13 |
| XM_026930321.2 | mRNA | downstream | 200 | 12497851 ~ 12507903 (+) | True | rtca |
| XM_026930427.2 | mRNA | downstream | 15237 | 12512888 ~ 12559103 (+) | False | cdc14ab |
| XM_026930429.2 | mRNA | downstream | 15237 | 12512888 ~ 12559103 (+) | False | cdc14ab |
| XM_026930428.2 | mRNA | downstream | 15237 | 12512888 ~ 12559103 (+) | False | cdc14ab |
| XM_034308860.1 | mRNA | downstream | 67567 | 12565218 ~ 12566601 (+) | True | LOC117598419 |
| trnag-ucc_15 | other | upstream | 108490 | 12388170 ~ 12388241 (+) | True | trnag-ucc_15 |
| TU213163 | other | upstream | 163100 | 12328066 ~ 12333631 (+) | False | timm13 |
| TU213106 | other | upstream | 440982 | 12054958 ~ 12055749 (+) | True | G180121 |
| TU212683 | other | upstream | 1067392 | 11428613 ~ 11429339 (+) | False | G179758 |
| XR_003403710.1 | other | upstream | 1078488 | 11418114 ~ 11418243 (+) | True | LOC113536800 |
| TU213294 | other | downstream | 75542 | 12573193 ~ 12602064 (+) | False | LOC117598398 |
| TU213850 | other | downstream | 598722 | 13096373 ~ 13098156 (+) | False | ankmy1 |
| trnag-gcc_9 | other | downstream | 752719 | 13250370 ~ 13250441 (+) | True | trnag-gcc_9 |
| trnag-gcc_10 | other | downstream | 758406 | 13256057 ~ 13256124 (+) | True | trnag-gcc_10 |
| trnag-gcc_11 | other | downstream | 760357 | 13258008 ~ 13258076 (+) | True | trnag-gcc_11 |
