Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU213916 |
| length | 525 |
| lncRNA type | read_through |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G180738 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 13201871 ~ 13285070 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU213678 | lncRNA | upstream | 350692 | 12850960 ~ 12851179 (+) | True | G180534 |
| TU213659 | lncRNA | upstream | 360589 | 12836868 ~ 12841282 (+) | True | G180516 |
| TU213315 | lncRNA | upstream | 519308 | 12654422 ~ 12682563 (+) | True | G180268 |
| TU213314 | lncRNA | upstream | 547656 | 12653796 ~ 12654215 (+) | True | G180267 |
| TU213271 | lncRNA | upstream | 640090 | 12543667 ~ 12561781 (+) | True | cdc14ab |
| TU214029 | lncRNA | downstream | 14210 | 13299280 ~ 13302297 (+) | True | G180833 |
| TU214035 | lncRNA | downstream | 116817 | 13401887 ~ 13406255 (+) | True | G180838 |
| TU214147 | lncRNA | downstream | 162875 | 13447945 ~ 13448184 (+) | True | G180926 |
| TU214166 | lncRNA | downstream | 344625 | 13629695 ~ 13640963 (+) | True | G180945 |
| TU214388 | lncRNA | downstream | 812590 | 14097660 ~ 14100987 (+) | True | G181136 |
| XM_034308898.1 | mRNA | upstream | 90165 | 13096712 ~ 13111706 (+) | True | ankmy1 |
| XM_026930730.2 | mRNA | upstream | 106908 | 13088273 ~ 13094963 (+) | True | hsh2d |
| XM_026930729.2 | mRNA | upstream | 106908 | 13088274 ~ 13094963 (+) | False | hsh2d |
| XM_034308546.1 | mRNA | upstream | 107481 | 13088273 ~ 13094390 (+) | False | hsh2d |
| XM_026930432.2 | mRNA | upstream | 116805 | 13071767 ~ 13085066 (+) | False | tpm4a |
| XM_026927676.2 | mRNA | downstream | 23371 | 13308441 ~ 13313447 (+) | False | cep19 |
| XM_026927683.2 | mRNA | downstream | 23601 | 13308671 ~ 13313447 (+) | True | cep19 |
| XM_034308910.1 | mRNA | downstream | 23778 | 13308848 ~ 13313447 (+) | False | cep19 |
| XM_034308819.1 | mRNA | downstream | 34873 | 13319943 ~ 13368258 (+) | True | impact |
| XM_026923575.2 | mRNA | downstream | 94726 | 13379796 ~ 13397775 (+) | True | LOC113532271 |
| TU213850 | other | upstream | 103715 | 13096373 ~ 13098156 (+) | False | ankmy1 |
| TU213294 | other | upstream | 599807 | 12573193 ~ 12602064 (+) | False | LOC117598398 |
| trnag-ucc_15 | other | upstream | 813630 | 12388170 ~ 12388241 (+) | True | trnag-ucc_15 |
| TU213163 | other | upstream | 868240 | 12328066 ~ 12333631 (+) | False | timm13 |
| TU213106 | other | upstream | 1146122 | 12054958 ~ 12055749 (+) | True | G180121 |
| TU214031 | other | downstream | 16185 | 13301255 ~ 13305716 (+) | True | G180834 |
| TU214157 | other | downstream | 210520 | 13495590 ~ 13495985 (+) | True | G180936 |
| TU214440 | other | downstream | 879956 | 14165026 ~ 14174218 (+) | True | G181175 |
| TU214656 | other | downstream | 1276620 | 14561690 ~ 14562966 (+) | False | LOC113540185 |
| TU214729 | other | downstream | 1304849 | 14589919 ~ 14594615 (+) | False | ankrd29 |
