Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026930329.2 |
| length | 1171 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 3 |
| gene id | aqp12 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 13236477 ~ 13239637 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0071391 | cellular response to estrogen stimulus | biological_process |
| GO:0016020 | membrane | cellular_component |
| id | description |
|---|---|
| K09871 | AQP12; aquaporin-12 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU213871 | lncRNA | upstream | 33850 | 13136137 ~ 13203148 (+) | True | G180695 |
| TU213678 | lncRNA | upstream | 385819 | 12850960 ~ 12851179 (+) | True | G180534 |
| TU213659 | lncRNA | upstream | 395716 | 12836868 ~ 12841282 (+) | True | G180516 |
| TU213315 | lncRNA | upstream | 554435 | 12654422 ~ 12682563 (+) | True | G180268 |
| TU213314 | lncRNA | upstream | 582783 | 12653796 ~ 12654215 (+) | True | G180267 |
| TU214029 | lncRNA | downstream | 59643 | 13299280 ~ 13302297 (+) | True | G180833 |
| TU214035 | lncRNA | downstream | 162250 | 13401887 ~ 13406255 (+) | True | G180838 |
| TU214147 | lncRNA | downstream | 208308 | 13447945 ~ 13448184 (+) | True | G180926 |
| TU214166 | lncRNA | downstream | 390058 | 13629695 ~ 13640963 (+) | True | G180945 |
| TU214388 | lncRNA | downstream | 858023 | 14097660 ~ 14100987 (+) | True | G181136 |
| XM_034308898.1 | mRNA | upstream | 125292 | 13096712 ~ 13111706 (+) | True | ankmy1 |
| XM_026930730.2 | mRNA | upstream | 142035 | 13088273 ~ 13094963 (+) | True | hsh2d |
| XM_026930729.2 | mRNA | upstream | 142035 | 13088274 ~ 13094963 (+) | False | hsh2d |
| XM_034308546.1 | mRNA | upstream | 142608 | 13088273 ~ 13094390 (+) | False | hsh2d |
| XM_026930434.2 | mRNA | upstream | 151067 | 13071766 ~ 13085931 (+) | False | tpm4a |
| XM_034308887.1 | mRNA | downstream | 38321 | 13277958 ~ 13280512 (+) | True | LOC117598427 |
| XM_026927676.2 | mRNA | downstream | 68804 | 13308441 ~ 13313447 (+) | False | cep19 |
| XM_026927683.2 | mRNA | downstream | 69034 | 13308671 ~ 13313447 (+) | True | cep19 |
| XM_034308910.1 | mRNA | downstream | 69211 | 13308848 ~ 13313447 (+) | False | cep19 |
| XM_034308819.1 | mRNA | downstream | 80306 | 13319943 ~ 13368258 (+) | True | impact |
| TU213850 | other | upstream | 138842 | 13096373 ~ 13098156 (+) | False | ankmy1 |
| TU213294 | other | upstream | 634934 | 12573193 ~ 12602064 (+) | False | LOC117598398 |
| trnag-ucc_15 | other | upstream | 848757 | 12388170 ~ 12388241 (+) | True | trnag-ucc_15 |
| TU213163 | other | upstream | 903367 | 12328066 ~ 12333631 (+) | False | timm13 |
| TU213106 | other | upstream | 1181249 | 12054958 ~ 12055749 (+) | True | G180121 |
| trnag-gcc_9 | other | downstream | 10733 | 13250370 ~ 13250441 (+) | True | trnag-gcc_9 |
| trnag-gcc_10 | other | downstream | 16420 | 13256057 ~ 13256124 (+) | True | trnag-gcc_10 |
| trnag-gcc_11 | other | downstream | 18371 | 13258008 ~ 13258076 (+) | True | trnag-gcc_11 |
| trnag-gcc_12 | other | downstream | 24187 | 13263824 ~ 13263894 (+) | True | trnag-gcc_12 |
| trnag-gcc_13 | other | downstream | 26127 | 13265764 ~ 13265835 (+) | True | trnag-gcc_13 |
