Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU214029 |
| length | 450 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G180833 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 13299280 ~ 13302297 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU213916 | lncRNA | upstream | 14210 | 13201871 ~ 13285070 (+) | True | G180738 |
| TU213946 | lncRNA | upstream | 59697 | 13236477 ~ 13239583 (+) | False | aqp12 |
| TU213871 | lncRNA | upstream | 96132 | 13136137 ~ 13203148 (+) | True | G180695 |
| TU213678 | lncRNA | upstream | 448101 | 12850960 ~ 12851179 (+) | True | G180534 |
| TU213659 | lncRNA | upstream | 457998 | 12836868 ~ 12841282 (+) | True | G180516 |
| TU214035 | lncRNA | downstream | 99590 | 13401887 ~ 13406255 (+) | True | G180838 |
| TU214147 | lncRNA | downstream | 145648 | 13447945 ~ 13448184 (+) | True | G180926 |
| TU214166 | lncRNA | downstream | 327398 | 13629695 ~ 13640963 (+) | True | G180945 |
| TU214388 | lncRNA | downstream | 795363 | 14097660 ~ 14100987 (+) | True | G181136 |
| TU214419 | lncRNA | downstream | 843576 | 14145873 ~ 14293381 (+) | True | G181157 |
| XM_034308887.1 | mRNA | upstream | 18768 | 13277958 ~ 13280512 (+) | True | LOC117598427 |
| XM_026930329.2 | mRNA | upstream | 59643 | 13236998 ~ 13239637 (+) | True | aqp12 |
| XM_034308898.1 | mRNA | upstream | 187574 | 13096712 ~ 13111706 (+) | True | ankmy1 |
| XM_026930730.2 | mRNA | upstream | 204317 | 13088273 ~ 13094963 (+) | True | hsh2d |
| XM_026930729.2 | mRNA | upstream | 204317 | 13088274 ~ 13094963 (+) | False | hsh2d |
| XM_026927676.2 | mRNA | downstream | 6144 | 13308441 ~ 13313447 (+) | False | cep19 |
| XM_026927683.2 | mRNA | downstream | 6374 | 13308671 ~ 13313447 (+) | True | cep19 |
| XM_034308910.1 | mRNA | downstream | 6551 | 13308848 ~ 13313447 (+) | False | cep19 |
| XM_034308819.1 | mRNA | downstream | 17646 | 13319943 ~ 13368258 (+) | True | impact |
| XM_026923575.2 | mRNA | downstream | 77499 | 13379796 ~ 13397775 (+) | True | LOC113532271 |
| trnag-gcc_17 | other | upstream | 23724 | 13275486 ~ 13275556 (+) | True | trnag-gcc_17 |
| trnag-gcc_16 | other | upstream | 25663 | 13273548 ~ 13273617 (+) | True | trnag-gcc_16 |
| trnag-gcc_15 | other | upstream | 29551 | 13269656 ~ 13269729 (+) | True | trnag-gcc_15 |
| trnag-gcc_14 | other | upstream | 31503 | 13267707 ~ 13267777 (+) | True | trnag-gcc_14 |
| trnag-gcc_13 | other | upstream | 33445 | 13265764 ~ 13265835 (+) | True | trnag-gcc_13 |
| TU214157 | other | downstream | 193293 | 13495590 ~ 13495985 (+) | True | G180936 |
| TU214440 | other | downstream | 862729 | 14165026 ~ 14174218 (+) | True | G181175 |
| TU214656 | other | downstream | 1259393 | 14561690 ~ 14562966 (+) | False | LOC113540185 |
| TU214729 | other | downstream | 1287622 | 14589919 ~ 14594615 (+) | False | ankrd29 |
| XR_004579085.1 | other | downstream | 1320246 | 14622543 ~ 14646822 (+) | True | si:dkey-121a11.3 |
