Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308501.1 |
| length | 913 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 2 |
| gene id | LOC113540185 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 14561555 ~ 14563010 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU214585 | lncRNA | upstream | 123547 | 14437375 ~ 14438009 (+) | True | G181300 |
| TU214531 | lncRNA | upstream | 151479 | 14409722 ~ 14410077 (+) | True | G181252 |
| TU214515 | lncRNA | upstream | 182083 | 14375493 ~ 14379473 (+) | True | G181236 |
| TU214510 | lncRNA | upstream | 200184 | 14360788 ~ 14361372 (+) | True | G181233 |
| TU214415 | lncRNA | upstream | 321021 | 14222251 ~ 14240535 (+) | False | LOC113531387 |
| TU214732 | lncRNA | downstream | 59626 | 14622636 ~ 14622971 (+) | False | si:dkey-121a11.3 |
| TU214730 | lncRNA | downstream | 84605 | 14647615 ~ 14649626 (+) | False | si:dkey-121a11.3 |
| TU214795 | lncRNA | downstream | 101691 | 14664701 ~ 14665064 (+) | True | G181475 |
| TU214912 | lncRNA | downstream | 304917 | 14867927 ~ 14930862 (+) | True | G181588 |
| TU214923 | lncRNA | downstream | 397875 | 14960885 ~ 14977551 (+) | True | G181599 |
| XM_026923484.2 | mRNA | upstream | 73744 | 14481557 ~ 14487812 (+) | True | mydgf |
| XM_026930928.2 | mRNA | upstream | 83805 | 14473342 ~ 14477751 (+) | True | mibp |
| XM_034308400.1 | mRNA | upstream | 83805 | 14474291 ~ 14477751 (+) | False | mibp |
| XM_026917247.2 | mRNA | upstream | 91569 | 14463188 ~ 14469987 (+) | True | atcaya |
| XM_026919990.2 | mRNA | upstream | 171003 | 14383457 ~ 14390553 (+) | True | c11h19orf44 |
| XM_026927929.2 | mRNA | downstream | 26870 | 14589880 ~ 14599979 (+) | True | ankrd29 |
| XM_034308982.1 | mRNA | downstream | 37420 | 14600430 ~ 14611565 (+) | True | LOC113527219 |
| XM_026920060.2 | mRNA | downstream | 59533 | 14622543 ~ 14649685 (+) | False | si:dkey-121a11.3 |
| XM_026917034.2 | mRNA | downstream | 107871 | 14670881 ~ 14672730 (+) | True | ier5 |
| XM_026928780.2 | mRNA | downstream | 133573 | 14696583 ~ 14704088 (+) | True | tal1 |
| TU214440 | other | upstream | 387338 | 14165026 ~ 14174218 (+) | True | G181175 |
| TU214157 | other | upstream | 1065571 | 13495590 ~ 13495985 (+) | True | G180936 |
| TU214031 | other | upstream | 1255840 | 13301255 ~ 13305716 (+) | True | G180834 |
| trnag-gcc_17 | other | upstream | 1286000 | 13275486 ~ 13275556 (+) | True | trnag-gcc_17 |
| trnag-gcc_16 | other | upstream | 1287939 | 13273548 ~ 13273617 (+) | True | trnag-gcc_16 |
| TU214729 | other | downstream | 26909 | 14589919 ~ 14594615 (+) | False | ankrd29 |
| XR_004579085.1 | other | downstream | 59533 | 14622543 ~ 14646822 (+) | True | si:dkey-121a11.3 |
| XR_004579090.1 | other | downstream | 145917 | 14708927 ~ 14711727 (+) | False | pdzk1ip1 |
| TU215983 | other | downstream | 1692053 | 16255063 ~ 16255852 (+) | False | LOC113532318 |
| XR_003403746.1 | other | downstream | 2017226 | 16580236 ~ 16580303 (+) | True | LOC113537281 |
