Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU215580 |
| length | 634 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G182131 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 15744780 ~ 15745413 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko04721 | Synaptic vesicle cycle |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU215579 | lncRNA | upstream | 343 | 15722653 ~ 15744437 (+) | True | LOC113533795 |
| TU215565 | lncRNA | upstream | 70798 | 15668828 ~ 15673982 (+) | True | borcs8 |
| TU215564 | lncRNA | upstream | 71354 | 15668828 ~ 15673426 (+) | False | borcs8 |
| TU215447 | lncRNA | upstream | 228825 | 15515741 ~ 15515955 (+) | True | G182012 |
| XR_004579124.1 | lncRNA | upstream | 342655 | 15391070 ~ 15402125 (+) | True | LOC113534769 |
| TU215605 | lncRNA | downstream | 53270 | 15798683 ~ 15799329 (+) | True | G182154 |
| TU215606 | lncRNA | downstream | 59134 | 15804547 ~ 15804748 (+) | True | G182155 |
| TU215603 | lncRNA | downstream | 127597 | 15873010 ~ 15885825 (+) | False | G182152 |
| TU215602 | lncRNA | downstream | 134118 | 15879531 ~ 15885825 (+) | True | G182152 |
| TU215618 | lncRNA | downstream | 147879 | 15893292 ~ 15893527 (+) | True | G182167 |
| XM_026912605.2 | mRNA | upstream | 52670 | 15675692 ~ 15692110 (+) | True | mef2b |
| XM_026912664.2 | mRNA | upstream | 71335 | 15668798 ~ 15673445 (+) | False | borcs8 |
| XM_026912680.2 | mRNA | upstream | 71335 | 15668798 ~ 15673445 (+) | False | borcs8 |
| XM_026912688.2 | mRNA | upstream | 74573 | 15668798 ~ 15670207 (+) | False | borcs8 |
| XM_026912651.2 | mRNA | upstream | 79054 | 15662485 ~ 15665726 (+) | True | nr2c2ap |
| XM_034308771.1 | mRNA | downstream | 31273 | 15776686 ~ 15800617 (+) | False | gatad2ab |
| XM_026920973.2 | mRNA | downstream | 31273 | 15776686 ~ 15800617 (+) | False | gatad2ab |
| XM_026920956.2 | mRNA | downstream | 31274 | 15776687 ~ 15800617 (+) | True | gatad2ab |
| XM_034308770.1 | mRNA | downstream | 32055 | 15777468 ~ 15800617 (+) | False | gatad2ab |
| XM_026946813.2 | mRNA | downstream | 59873 | 15805286 ~ 15838980 (+) | True | yjefn3 |
| XR_004579090.1 | other | upstream | 1033053 | 14708927 ~ 14711727 (+) | False | pdzk1ip1 |
| XR_004579085.1 | other | upstream | 1097958 | 14622543 ~ 14646822 (+) | True | si:dkey-121a11.3 |
| TU214729 | other | upstream | 1150165 | 14589919 ~ 14594615 (+) | False | ankrd29 |
| TU214656 | other | upstream | 1181814 | 14561690 ~ 14562966 (+) | False | LOC113540185 |
| TU214440 | other | upstream | 1570562 | 14165026 ~ 14174218 (+) | True | G181175 |
| TU215983 | other | downstream | 509650 | 16255063 ~ 16255852 (+) | False | LOC113532318 |
| XR_003403746.1 | other | downstream | 834823 | 16580236 ~ 16580303 (+) | True | LOC113537281 |
| TU216336 | other | downstream | 837890 | 16583303 ~ 16584943 (+) | True | G182819 |
| TU216450 | other | downstream | 1167845 | 16913258 ~ 16922922 (+) | True | G182877 |
| trnak-cuu_26 | other | downstream | 1284459 | 17029872 ~ 17029944 (+) | True | trnak-cuu_26 |
