Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU215605 |
| length | 586 |
| lncRNA type | intronic |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G182154 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 15798683 ~ 15799329 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579097.1 | lncRNA | upstream | 42816 | 15713433 ~ 15755867 (+) | False | LOC113533795 |
| XR_004579102.1 | lncRNA | upstream | 42816 | 15714252 ~ 15755867 (+) | False | LOC113533795 |
| XR_004579098.1 | lncRNA | upstream | 42816 | 15718529 ~ 15755867 (+) | False | LOC113533795 |
| XR_004579100.1 | lncRNA | upstream | 42816 | 15722806 ~ 15755867 (+) | False | LOC113533795 |
| XR_004579099.1 | lncRNA | upstream | 42816 | 15724374 ~ 15755867 (+) | False | LOC113533795 |
| TU215606 | lncRNA | downstream | 5218 | 15804547 ~ 15804748 (+) | True | G182155 |
| TU215603 | lncRNA | downstream | 73681 | 15873010 ~ 15885825 (+) | False | G182152 |
| TU215602 | lncRNA | downstream | 80202 | 15879531 ~ 15885825 (+) | True | G182152 |
| TU215618 | lncRNA | downstream | 93963 | 15893292 ~ 15893527 (+) | True | G182167 |
| TU215560 | lncRNA | downstream | 138771 | 15938100 ~ 15987981 (+) | True | G182115 |
| XM_026912605.2 | mRNA | upstream | 106573 | 15675692 ~ 15692110 (+) | True | mef2b |
| XM_026912664.2 | mRNA | upstream | 125238 | 15668798 ~ 15673445 (+) | False | borcs8 |
| XM_026912680.2 | mRNA | upstream | 125238 | 15668798 ~ 15673445 (+) | False | borcs8 |
| XM_026912688.2 | mRNA | upstream | 128476 | 15668798 ~ 15670207 (+) | False | borcs8 |
| XM_026912651.2 | mRNA | upstream | 132957 | 15662485 ~ 15665726 (+) | True | nr2c2ap |
| XM_026946813.2 | mRNA | downstream | 5957 | 15805286 ~ 15838980 (+) | True | yjefn3 |
| XM_026926784.2 | mRNA | downstream | 41668 | 15840997 ~ 15855719 (+) | True | cilp2 |
| XM_026928114.2 | mRNA | downstream | 213139 | 16012468 ~ 16030851 (+) | True | cbarpb |
| XM_026947079.2 | mRNA | downstream | 257587 | 16056916 ~ 16063110 (+) | True | fstl3 |
| XM_026946320.2 | mRNA | downstream | 257595 | 16056924 ~ 16063110 (+) | False | fstl3 |
| XR_004579090.1 | other | upstream | 1086956 | 14708927 ~ 14711727 (+) | False | pdzk1ip1 |
| XR_004579085.1 | other | upstream | 1151861 | 14622543 ~ 14646822 (+) | True | si:dkey-121a11.3 |
| TU214729 | other | upstream | 1204068 | 14589919 ~ 14594615 (+) | False | ankrd29 |
| TU214656 | other | upstream | 1235717 | 14561690 ~ 14562966 (+) | False | LOC113540185 |
| TU214440 | other | upstream | 1624465 | 14165026 ~ 14174218 (+) | True | G181175 |
| TU215983 | other | downstream | 455734 | 16255063 ~ 16255852 (+) | False | LOC113532318 |
| XR_003403746.1 | other | downstream | 780907 | 16580236 ~ 16580303 (+) | True | LOC113537281 |
| TU216336 | other | downstream | 783974 | 16583303 ~ 16584943 (+) | True | G182819 |
| TU216450 | other | downstream | 1113929 | 16913258 ~ 16922922 (+) | True | G182877 |
| trnak-cuu_26 | other | downstream | 1230543 | 17029872 ~ 17029944 (+) | True | trnak-cuu_26 |
