Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308828.1 |
| length | 1168 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 5 |
| gene id | LOC113532318 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 16255047 ~ 16256782 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008236 | serine-type peptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU215642 | lncRNA | upstream | 245812 | 16006054 ~ 16009235 (+) | True | G182190 |
| TU215562 | lncRNA | upstream | 264637 | 15988630 ~ 15990410 (+) | True | G182116 |
| TU215560 | lncRNA | upstream | 267066 | 15938100 ~ 15987981 (+) | True | G182115 |
| TU215618 | lncRNA | upstream | 361520 | 15893292 ~ 15893527 (+) | True | G182167 |
| TU215602 | lncRNA | upstream | 369222 | 15879531 ~ 15885825 (+) | True | G182152 |
| TU215985 | lncRNA | downstream | 3276 | 16260058 ~ 16260316 (+) | True | G182483 |
| XR_004579080.1 | lncRNA | downstream | 451843 | 16708625 ~ 16720748 (+) | False | LOC117598408 |
| TU216395 | lncRNA | downstream | 456931 | 16713713 ~ 16725527 (+) | True | LOC117598408 |
| XR_004579047.1 | lncRNA | downstream | 595626 | 16852408 ~ 16857137 (+) | True | LOC117598387 |
| TU216484 | lncRNA | downstream | 703877 | 16960659 ~ 16961299 (+) | True | G182906 |
| XM_034308470.1 | mRNA | upstream | 5856 | 16247727 ~ 16249191 (+) | True | LOC113538695 |
| XM_026934012.2 | mRNA | upstream | 5856 | 16247727 ~ 16249191 (+) | False | LOC113538695 |
| XM_026933795.2 | mRNA | upstream | 21210 | 16211346 ~ 16233837 (+) | False | LOC113538485 |
| XM_026933710.2 | mRNA | upstream | 21210 | 16211347 ~ 16233837 (+) | True | LOC113538485 |
| XM_026933882.2 | mRNA | upstream | 21210 | 16211357 ~ 16233837 (+) | False | LOC113538485 |
| XM_026925202.2 | mRNA | downstream | 16186 | 16272968 ~ 16275203 (+) | True | LOC113533225 |
| XM_026927435.2 | mRNA | downstream | 23197 | 16279979 ~ 16285280 (+) | True | hsd11b1la |
| XM_026930811.2 | mRNA | downstream | 65374 | 16322156 ~ 16328589 (+) | True | rgmd |
| XM_026942858.2 | mRNA | downstream | 320752 | 16577534 ~ 16582783 (+) | True | LOC113544157 |
| XM_026929196.2 | mRNA | downstream | 341178 | 16597960 ~ 16602762 (+) | True | hmg20b |
| XR_004579090.1 | other | upstream | 1543320 | 14708927 ~ 14711727 (+) | False | pdzk1ip1 |
| XR_004579085.1 | other | upstream | 1608225 | 14622543 ~ 14646822 (+) | True | si:dkey-121a11.3 |
| TU214729 | other | upstream | 1660432 | 14589919 ~ 14594615 (+) | False | ankrd29 |
| TU214656 | other | upstream | 1692081 | 14561690 ~ 14562966 (+) | False | LOC113540185 |
| TU214440 | other | upstream | 2080829 | 14165026 ~ 14174218 (+) | True | G181175 |
| XR_003403746.1 | other | downstream | 323454 | 16580236 ~ 16580303 (+) | True | LOC113537281 |
| TU216336 | other | downstream | 326521 | 16583303 ~ 16584943 (+) | True | G182819 |
| TU216450 | other | downstream | 656476 | 16913258 ~ 16922922 (+) | True | G182877 |
| trnak-cuu_26 | other | downstream | 773090 | 17029872 ~ 17029944 (+) | True | trnak-cuu_26 |
| XR_003402991.2 | other | downstream | 939498 | 17196280 ~ 17215883 (+) | False | LOC113528769 |
