Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU217312 |
| length | 1145 |
| RNA type | TUCP |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G183549 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 17795445 ~ 17796619 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU217213 | lncRNA | upstream | 70185 | 17724763 ~ 17725260 (+) | True | G183478 |
| TU216676 | lncRNA | upstream | 211660 | 17577642 ~ 17583785 (+) | False | G183058 |
| TU216673 | lncRNA | upstream | 215331 | 17577740 ~ 17580114 (+) | True | G183058 |
| TU216632 | lncRNA | upstream | 344709 | 17450457 ~ 17450736 (+) | True | G183032 |
| TU216612 | lncRNA | upstream | 372226 | 17416770 ~ 17423219 (+) | False | LOC113535983 |
| TU217332 | lncRNA | downstream | 91508 | 17888127 ~ 17888353 (+) | True | G183566 |
| TU217344 | lncRNA | downstream | 106166 | 17902785 ~ 17902984 (+) | True | G183578 |
| TU217351 | lncRNA | downstream | 119384 | 17916003 ~ 17916210 (+) | True | G183585 |
| TU217463 | lncRNA | downstream | 370003 | 18166622 ~ 18237120 (+) | False | LOC113526284 |
| TU217556 | lncRNA | downstream | 632887 | 18429506 ~ 18437961 (+) | True | G183787 |
| XM_034308929.1 | mRNA | upstream | 13631 | 17754176 ~ 17781814 (+) | True | ect2 |
| XM_034308930.1 | mRNA | upstream | 13631 | 17754176 ~ 17781814 (+) | False | ect2 |
| XM_026927825.2 | mRNA | upstream | 13631 | 17754178 ~ 17781814 (+) | False | ect2 |
| XM_026927834.2 | mRNA | upstream | 13631 | 17754178 ~ 17781814 (+) | False | ect2 |
| XM_026924630.2 | mRNA | upstream | 43943 | 17672171 ~ 17751502 (+) | False | mcf2l2 |
| XM_026928425.2 | mRNA | downstream | 81621 | 17878240 ~ 18133981 (+) | False | nlgn1 |
| XM_034308974.1 | mRNA | downstream | 137297 | 17933916 ~ 18133981 (+) | True | nlgn1 |
| XM_026928415.2 | mRNA | downstream | 137297 | 17933916 ~ 18133981 (+) | False | nlgn1 |
| XM_034308975.1 | mRNA | downstream | 137297 | 17933916 ~ 18133981 (+) | False | nlgn1 |
| XM_026928435.2 | mRNA | downstream | 137297 | 17933916 ~ 18133981 (+) | False | nlgn1 |
| TU217273 | other | upstream | 13632 | 17773713 ~ 17781813 (+) | False | ect2 |
| XR_004579060.1 | other | upstream | 43943 | 17672171 ~ 17751502 (+) | True | mcf2l2 |
| XR_003403373.2 | other | upstream | 46154 | 17672171 ~ 17749291 (+) | False | mcf2l2 |
| XR_004579126.1 | other | upstream | 159050 | 17598464 ~ 17636395 (+) | True | anos1b |
| TU216628 | other | upstream | 350386 | 17439796 ~ 17445059 (+) | False | LOC113536271 |
| TU218227 | other | downstream | 1458338 | 19254957 ~ 19269222 (+) | False | adgrl4 |
| TU218488 | other | downstream | 1735462 | 19532081 ~ 19553522 (+) | False | si:ch73-40i7.5 |
| TU218486 | other | downstream | 1753763 | 19550382 ~ 19553522 (+) | False | si:ch73-40i7.5 |
| TU218602 | other | downstream | 1898625 | 19695244 ~ 19700274 (+) | True | rps15 |
| XR_004579107.1 | other | downstream | 2031367 | 19827986 ~ 19834414 (+) | False | tax1bp3 |
