Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU218369 |
| length | 1020 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G184503 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 19461824 ~ 19462843 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU218370 | lncRNA | upstream | 134 | 19459818 ~ 19461690 (+) | True | G184504 |
| TU218173 | lncRNA | upstream | 380339 | 19081252 ~ 19081485 (+) | True | G184340 |
| TU218141 | lncRNA | upstream | 449212 | 19012407 ~ 19012612 (+) | True | G184309 |
| TU217958 | lncRNA | upstream | 566949 | 18891239 ~ 18894875 (+) | True | G184167 |
| TU217565 | lncRNA | upstream | 856902 | 18598718 ~ 18604922 (+) | True | G183796 |
| TU218362 | lncRNA | downstream | 23529 | 19486372 ~ 19487778 (+) | False | smim7 |
| TU218363 | lncRNA | downstream | 23529 | 19486372 ~ 19487778 (+) | True | smim7 |
| TU218480 | lncRNA | downstream | 64034 | 19526877 ~ 19545502 (+) | False | LOC113546543 |
| TU218491 | lncRNA | downstream | 85820 | 19548663 ~ 19602639 (+) | True | G184614 |
| TU218492 | lncRNA | downstream | 85820 | 19548663 ~ 19550326 (+) | False | G184614 |
| XM_026930849.2 | mRNA | upstream | 3650 | 19442164 ~ 19458174 (+) | True | crtc1b |
| XM_034308396.1 | mRNA | upstream | 3650 | 19442164 ~ 19458174 (+) | False | crtc1b |
| XM_026930857.2 | mRNA | upstream | 3650 | 19442165 ~ 19458174 (+) | False | crtc1b |
| XM_026919525.2 | mRNA | upstream | 22643 | 19429911 ~ 19439181 (+) | True | klhl26 |
| XM_026919355.2 | mRNA | upstream | 45649 | 19405686 ~ 19416175 (+) | True | rab3ab |
| XM_026923920.2 | mRNA | downstream | 23485 | 19486328 ~ 19487784 (+) | False | smim7 |
| XM_026928296.2 | mRNA | downstream | 27589 | 19490432 ~ 19495901 (+) | True | LOC113535100 |
| XM_026929979.2 | mRNA | downstream | 35520 | 19498363 ~ 19505101 (+) | True | slc35e1 |
| XM_034308463.1 | mRNA | downstream | 46190 | 19509033 ~ 19524997 (+) | True | si:ch73-40i7.2 |
| XM_034308528.1 | mRNA | downstream | 64203 | 19527046 ~ 19531687 (+) | True | LOC117595669 |
| TU218227 | other | upstream | 192602 | 19254957 ~ 19269222 (+) | False | adgrl4 |
| TU217312 | other | upstream | 1665205 | 17795445 ~ 17796619 (+) | True | G183549 |
| TU217273 | other | upstream | 1680011 | 17773713 ~ 17781813 (+) | False | ect2 |
| XR_004579060.1 | other | upstream | 1710322 | 17672171 ~ 17751502 (+) | True | mcf2l2 |
| TU218488 | other | downstream | 69238 | 19532081 ~ 19553522 (+) | False | si:ch73-40i7.5 |
| TU218486 | other | downstream | 87539 | 19550382 ~ 19553522 (+) | False | si:ch73-40i7.5 |
| TU218602 | other | downstream | 232401 | 19695244 ~ 19700274 (+) | True | rps15 |
| XR_004579107.1 | other | downstream | 365143 | 19827986 ~ 19834414 (+) | False | tax1bp3 |
| XR_003403385.2 | other | downstream | 402955 | 19865798 ~ 19871463 (+) | True | ccl44 |
