Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU219404 |
| length | 965 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 6 |
| gene id | G185381 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 20964535 ~ 20967901 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU219346 | lncRNA | upstream | 68074 | 20890247 ~ 20896461 (+) | True | G185330 |
| TU219189 | lncRNA | upstream | 256508 | 20705994 ~ 20708027 (+) | True | G185206 |
| TU219165 | lncRNA | upstream | 396243 | 20568076 ~ 20568292 (+) | True | G185182 |
| TU219046 | lncRNA | upstream | 409411 | 20554856 ~ 20555124 (+) | True | G185092 |
| TU219010 | lncRNA | upstream | 457855 | 20506477 ~ 20506680 (+) | True | G185063 |
| TU219446 | lncRNA | downstream | 34927 | 21002828 ~ 21024560 (+) | True | G185418 |
| TU219472 | lncRNA | downstream | 91163 | 21059064 ~ 21060228 (+) | True | G185436 |
| TU219486 | lncRNA | downstream | 109274 | 21077175 ~ 21084699 (+) | False | G185439 |
| TU219480 | lncRNA | downstream | 110771 | 21078672 ~ 21084699 (+) | False | G185439 |
| TU219481 | lncRNA | downstream | 110771 | 21078672 ~ 21084699 (+) | False | G185439 |
| XM_026912456.2 | mRNA | upstream | 16744 | 20932742 ~ 20947791 (+) | False | elovl1b |
| XM_026912465.2 | mRNA | upstream | 16744 | 20933212 ~ 20947791 (+) | True | elovl1b |
| XM_026912474.2 | mRNA | upstream | 16744 | 20934989 ~ 20947791 (+) | False | elovl1b |
| XM_026920038.2 | mRNA | upstream | 77191 | 20881535 ~ 20887344 (+) | True | LOC113530200 |
| XM_026920046.2 | mRNA | upstream | 77191 | 20882591 ~ 20887344 (+) | False | LOC113530200 |
| XM_026920807.2 | mRNA | downstream | 834 | 20968735 ~ 20989421 (+) | True | chrna4b |
| XM_026920815.2 | mRNA | downstream | 15131 | 20983032 ~ 20989421 (+) | False | chrna4b |
| XM_026927592.2 | mRNA | downstream | 61493 | 21029394 ~ 21036574 (+) | False | hcn5 |
| XM_026927583.2 | mRNA | downstream | 62357 | 21030258 ~ 21036574 (+) | True | hcn5 |
| XM_026915666.2 | mRNA | downstream | 75399 | 21043300 ~ 21050473 (+) | False | txlng |
| TU218923 | other | upstream | 813641 | 20149971 ~ 20150894 (+) | True | G184979 |
| XR_003403385.2 | other | upstream | 1093072 | 19865798 ~ 19871463 (+) | True | ccl44 |
| XR_004579107.1 | other | upstream | 1130121 | 19827986 ~ 19834414 (+) | False | tax1bp3 |
| TU218602 | other | upstream | 1264261 | 19695244 ~ 19700274 (+) | True | rps15 |
| TU218486 | other | upstream | 1411013 | 19550382 ~ 19553522 (+) | False | si:ch73-40i7.5 |
| XR_004579103.1 | other | downstream | 221885 | 21189786 ~ 21210539 (+) | False | wipf2a |
| trnap-agg_1 | other | downstream | 990987 | 21958888 ~ 21958959 (+) | True | trnap-agg_1 |
| trnaq-uug_2 | other | downstream | 2964965 | 23932866 ~ 23932937 (+) | True | trnaq-uug_2 |
| trnaq-cug_11 | other | downstream | 2966231 | 23934132 ~ 23934203 (+) | True | trnaq-cug_11 |
| trnaq-uug_3 | other | downstream | 2966734 | 23934635 ~ 23934706 (+) | True | trnaq-uug_3 |
