Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU219568 |
| length | 881 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G185501 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 21390844 ~ 21391810 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU219567 | lncRNA | upstream | 276 | 21390351 ~ 21390568 (+) | True | G185500 |
| TU219490 | lncRNA | upstream | 51130 | 21327254 ~ 21339714 (+) | False | G185439 |
| TU219569 | lncRNA | downstream | 3552 | 21395362 ~ 21404052 (+) | True | G185502 |
| TU219570 | lncRNA | downstream | 15669 | 21407479 ~ 21409792 (+) | True | G185503 |
| TU219589 | lncRNA | downstream | 52574 | 21444384 ~ 21446480 (+) | True | G185519 |
| TU219609 | lncRNA | downstream | 74522 | 21466332 ~ 21466938 (+) | True | G185533 |
| TU219622 | lncRNA | downstream | 96514 | 21488324 ~ 21488527 (+) | True | G185546 |
| XM_034308765.1 | mRNA | upstream | 638 | 21383873 ~ 21390206 (+) | True | lgsn |
| XM_026914590.2 | mRNA | upstream | 638 | 21383874 ~ 21390206 (+) | False | lgsn |
| XM_034308764.1 | mRNA | upstream | 638 | 21386972 ~ 21390206 (+) | False | lgsn |
| XM_026922435.2 | mRNA | upstream | 17473 | 21359474 ~ 21373371 (+) | True | col9a1a |
| XM_034308958.1 | mRNA | upstream | 40471 | 21346217 ~ 21350373 (+) | False | mrpl4 |
| XM_034308416.1 | mRNA | downstream | 140871 | 21532681 ~ 21552267 (+) | True | psmd14 |
| XM_026914564.2 | mRNA | downstream | 162891 | 21554701 ~ 21559002 (+) | True | tbr1a |
| XM_026918527.2 | mRNA | downstream | 169245 | 21561055 ~ 21605914 (+) | False | slc4a10a |
| XM_026918518.2 | mRNA | downstream | 169247 | 21561057 ~ 21605913 (+) | False | slc4a10a |
| XM_026918535.2 | mRNA | downstream | 169247 | 21561057 ~ 21605913 (+) | False | slc4a10a |
| XR_004579103.1 | other | upstream | 180305 | 21189786 ~ 21210539 (+) | False | wipf2a |
| TU218923 | other | upstream | 1239950 | 20149971 ~ 20150894 (+) | True | G184979 |
| XR_003403385.2 | other | upstream | 1519381 | 19865798 ~ 19871463 (+) | True | ccl44 |
| XR_004579107.1 | other | upstream | 1556430 | 19827986 ~ 19834414 (+) | False | tax1bp3 |
| TU218602 | other | upstream | 1690570 | 19695244 ~ 19700274 (+) | True | rps15 |
| trnap-agg_1 | other | downstream | 567078 | 21958888 ~ 21958959 (+) | True | trnap-agg_1 |
| trnaq-uug_2 | other | downstream | 2541056 | 23932866 ~ 23932937 (+) | True | trnaq-uug_2 |
| trnaq-cug_11 | other | downstream | 2542322 | 23934132 ~ 23934203 (+) | True | trnaq-cug_11 |
| trnaq-uug_3 | other | downstream | 2542825 | 23934635 ~ 23934706 (+) | True | trnaq-uug_3 |
| trnaq-uug_4 | other | downstream | 2545207 | 23937017 ~ 23937088 (+) | True | trnaq-uug_4 |
