Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU221181 |
| length | 208 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G186864 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 23791920 ~ 23792127 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU221123 | lncRNA | upstream | 77549 | 23712033 ~ 23714371 (+) | True | G186814 |
| TU221100 | lncRNA | upstream | 115352 | 23669018 ~ 23676568 (+) | True | G186798 |
| TU221099 | lncRNA | upstream | 115352 | 23671984 ~ 23676568 (+) | False | G186798 |
| TU220984 | lncRNA | upstream | 315423 | 23476115 ~ 23476497 (+) | True | G186699 |
| TU220923 | lncRNA | upstream | 372327 | 23405504 ~ 23419593 (+) | True | G186643 |
| TU221186 | lncRNA | downstream | 3603 | 23795730 ~ 23800962 (+) | True | G186868 |
| TU221202 | lncRNA | downstream | 34549 | 23826676 ~ 23827902 (+) | True | G186882 |
| TU221284 | lncRNA | downstream | 360988 | 24153115 ~ 24203702 (+) | True | G186949 |
| TU221288 | lncRNA | downstream | 363653 | 24155780 ~ 24162236 (+) | True | G186951 |
| TU221282 | lncRNA | downstream | 364475 | 24156602 ~ 24203702 (+) | False | G186949 |
| XM_026912961.2 | mRNA | upstream | 318351 | 23413029 ~ 23473569 (+) | True | LOC113526144 |
| XM_026912969.2 | mRNA | upstream | 318351 | 23413029 ~ 23473569 (+) | False | LOC113526144 |
| XM_034308532.1 | mRNA | upstream | 318351 | 23413029 ~ 23473569 (+) | False | LOC113526144 |
| XM_034308530.1 | mRNA | upstream | 324719 | 23413029 ~ 23467201 (+) | False | LOC113526144 |
| XM_034308531.1 | mRNA | upstream | 341272 | 23413029 ~ 23450648 (+) | False | LOC113526144 |
| XM_034308759.1 | mRNA | downstream | 43576 | 23835703 ~ 23926144 (+) | True | dennd1b |
| XM_026917310.2 | mRNA | downstream | 186746 | 23978873 ~ 24003792 (+) | True | aspm |
| XM_026917314.2 | mRNA | downstream | 186746 | 23978873 ~ 24003792 (+) | False | aspm |
| XM_026913018.2 | mRNA | downstream | 325691 | 24117818 ~ 24138641 (+) | True | b3galt2 |
| XM_026912863.2 | mRNA | downstream | 325691 | 24117818 ~ 24138641 (+) | False | b3galt2 |
| trnap-agg_1 | other | upstream | 1832961 | 21958888 ~ 21958959 (+) | True | trnap-agg_1 |
| XR_004579103.1 | other | upstream | 2581381 | 21189786 ~ 21210539 (+) | False | wipf2a |
| TU218923 | other | upstream | 3641026 | 20149971 ~ 20150894 (+) | True | G184979 |
| XR_003403385.2 | other | upstream | 3920457 | 19865798 ~ 19871463 (+) | True | ccl44 |
| XR_004579107.1 | other | upstream | 3957506 | 19827986 ~ 19834414 (+) | False | tax1bp3 |
| trnaq-uug_2 | other | downstream | 140739 | 23932866 ~ 23932937 (+) | True | trnaq-uug_2 |
| trnaq-cug_11 | other | downstream | 142005 | 23934132 ~ 23934203 (+) | True | trnaq-cug_11 |
| trnaq-uug_3 | other | downstream | 142508 | 23934635 ~ 23934706 (+) | True | trnaq-uug_3 |
| trnaq-uug_4 | other | downstream | 144890 | 23937017 ~ 23937088 (+) | True | trnaq-uug_4 |
| trnaq-cug_12 | other | downstream | 146182 | 23938309 ~ 23938380 (+) | True | trnaq-cug_12 |
