Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU221284 |
| length | 722 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 3 |
| gene id | G186949 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 24153115 ~ 24203702 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU221202 | lncRNA | upstream | 325213 | 23826676 ~ 23827902 (+) | True | G186882 |
| TU221186 | lncRNA | upstream | 352153 | 23795730 ~ 23800962 (+) | True | G186868 |
| TU221181 | lncRNA | upstream | 360988 | 23791920 ~ 23792127 (+) | True | G186864 |
| TU221123 | lncRNA | upstream | 438744 | 23712033 ~ 23714371 (+) | True | G186814 |
| TU221100 | lncRNA | upstream | 476547 | 23669018 ~ 23676568 (+) | True | G186798 |
| TU221643 | lncRNA | downstream | 307970 | 24511672 ~ 24512168 (+) | True | G187257 |
| TU221647 | lncRNA | downstream | 321982 | 24525684 ~ 24549720 (+) | False | G187258 |
| TU221648 | lncRNA | downstream | 321982 | 24525684 ~ 24552314 (+) | True | G187258 |
| TU221640 | lncRNA | downstream | 359761 | 24563463 ~ 24568611 (+) | False | oaz1a |
| TU221659 | lncRNA | downstream | 371313 | 24575015 ~ 24576233 (+) | True | G187265 |
| XM_026913018.2 | mRNA | upstream | 14474 | 24117818 ~ 24138641 (+) | True | b3galt2 |
| XM_026912863.2 | mRNA | upstream | 14474 | 24117818 ~ 24138641 (+) | False | b3galt2 |
| XM_026912944.2 | mRNA | upstream | 14474 | 24117818 ~ 24138641 (+) | False | b3galt2 |
| XM_034308432.1 | mRNA | upstream | 14474 | 24117818 ~ 24138641 (+) | False | b3galt2 |
| XM_026917310.2 | mRNA | upstream | 149323 | 23978873 ~ 24003792 (+) | True | aspm |
| XM_026947256.2 | mRNA | downstream | 4174 | 24207876 ~ 24210763 (+) | False | glrx2 |
| XM_026947260.2 | mRNA | downstream | 4186 | 24207888 ~ 24210763 (+) | False | glrx2 |
| XM_026947255.2 | mRNA | downstream | 4256 | 24207958 ~ 24210763 (+) | False | glrx2 |
| XM_026947254.2 | mRNA | downstream | 4269 | 24207971 ~ 24210763 (+) | False | glrx2 |
| XM_026947259.2 | mRNA | downstream | 4456 | 24208158 ~ 24210763 (+) | False | glrx2 |
| trnaq-uug_6 | other | upstream | 206052 | 23946992 ~ 23947063 (+) | True | trnaq-uug_6 |
| trnaq-uug_5 | other | upstream | 214227 | 23938817 ~ 23938888 (+) | True | trnaq-uug_5 |
| trnaq-cug_12 | other | upstream | 214735 | 23938309 ~ 23938380 (+) | True | trnaq-cug_12 |
| trnaq-uug_4 | other | upstream | 216027 | 23937017 ~ 23937088 (+) | True | trnaq-uug_4 |
| trnaq-uug_3 | other | upstream | 218409 | 23934635 ~ 23934706 (+) | True | trnaq-uug_3 |
| TU221326 | other | downstream | 4191 | 24207893 ~ 24210725 (+) | True | glrx2 |
| TU221328 | other | downstream | 4191 | 24207893 ~ 24210725 (+) | False | glrx2 |
| trnar-acg_9 | other | downstream | 1302721 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
| TU222375 | other | downstream | 1328043 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
| TU222713 | other | downstream | 1982160 | 26185862 ~ 26212109 (+) | False | polr2l |
