Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU221689 |
| length | 297 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G187286 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 24642759 ~ 24646662 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU221662 | lncRNA | upstream | 53056 | 24589326 ~ 24589703 (+) | True | G187268 |
| TU221659 | lncRNA | upstream | 66526 | 24575015 ~ 24576233 (+) | True | G187265 |
| TU221640 | lncRNA | upstream | 74148 | 24563463 ~ 24568611 (+) | False | oaz1a |
| TU221648 | lncRNA | upstream | 90445 | 24525684 ~ 24552314 (+) | True | G187258 |
| TU221647 | lncRNA | upstream | 93039 | 24525684 ~ 24549720 (+) | False | G187258 |
| TU221707 | lncRNA | downstream | 59505 | 24706167 ~ 24707504 (+) | True | G187294 |
| TU221722 | lncRNA | downstream | 89947 | 24736609 ~ 24737071 (+) | True | G187309 |
| TU221735 | lncRNA | downstream | 127103 | 24773765 ~ 24774186 (+) | True | G187316 |
| TU221673 | lncRNA | downstream | 157109 | 24803771 ~ 24806565 (+) | True | G187276 |
| TU221763 | lncRNA | downstream | 284983 | 24931645 ~ 24932046 (+) | True | G187340 |
| XM_034308773.1 | mRNA | upstream | 74116 | 24563400 ~ 24568643 (+) | True | oaz1a |
| XM_026947292.2 | mRNA | upstream | 84765 | 24554661 ~ 24557994 (+) | False | amh |
| XM_026947294.2 | mRNA | upstream | 84765 | 24554662 ~ 24557994 (+) | False | amh |
| XM_026947291.2 | mRNA | upstream | 84765 | 24554663 ~ 24557994 (+) | True | amh |
| XM_034308661.1 | mRNA | upstream | 94552 | 24520342 ~ 24548207 (+) | False | dot1l |
| XM_026947141.2 | mRNA | downstream | 2365 | 24649027 ~ 24653190 (+) | True | rrp36 |
| XM_026947129.2 | mRNA | downstream | 10242 | 24656904 ~ 24668500 (+) | True | tmem59l |
| XM_026947143.2 | mRNA | downstream | 37947 | 24684609 ~ 24704908 (+) | False | ankrd24 |
| XM_026947144.2 | mRNA | downstream | 37967 | 24684629 ~ 24704908 (+) | False | ankrd24 |
| XM_034308499.1 | mRNA | downstream | 37967 | 24684629 ~ 24702032 (+) | False | ankrd24 |
| TU221326 | other | upstream | 432034 | 24207893 ~ 24210725 (+) | True | glrx2 |
| TU221328 | other | upstream | 432034 | 24207893 ~ 24210725 (+) | False | glrx2 |
| trnaq-uug_6 | other | upstream | 695696 | 23946992 ~ 23947063 (+) | True | trnaq-uug_6 |
| trnaq-uug_5 | other | upstream | 703871 | 23938817 ~ 23938888 (+) | True | trnaq-uug_5 |
| trnaq-cug_12 | other | upstream | 704379 | 23938309 ~ 23938380 (+) | True | trnaq-cug_12 |
| trnar-acg_9 | other | downstream | 859761 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
| TU222375 | other | downstream | 885083 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
| TU222713 | other | downstream | 1539200 | 26185862 ~ 26212109 (+) | False | polr2l |
| TU222716 | other | downstream | 1560280 | 26206942 ~ 26210010 (+) | True | G188164 |
| TU222712 | other | downstream | 1563897 | 26210559 ~ 26212109 (+) | False | polr2l |
