Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU222133 |
| length | 324 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G187668 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 25272276 ~ 25272599 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222076 | lncRNA | upstream | 96187 | 25175808 ~ 25176089 (+) | True | G187612 |
| TU222026 | lncRNA | upstream | 150161 | 25121247 ~ 25122115 (+) | True | G187563 |
| TU221986 | lncRNA | upstream | 284183 | 24987879 ~ 24988093 (+) | True | G187527 |
| TU221763 | lncRNA | upstream | 340230 | 24931645 ~ 24932046 (+) | True | G187340 |
| TU221673 | lncRNA | upstream | 465711 | 24803771 ~ 24806565 (+) | True | G187276 |
| TU222140 | lncRNA | downstream | 17914 | 25290513 ~ 25290974 (+) | True | G187675 |
| TU222258 | lncRNA | downstream | 72692 | 25345291 ~ 25345491 (+) | True | G187782 |
| TU222386 | lncRNA | downstream | 474511 | 25747110 ~ 25750632 (+) | True | G187895 |
| TU222471 | lncRNA | downstream | 645952 | 25918551 ~ 25919605 (+) | True | G187961 |
| TU222482 | lncRNA | downstream | 669293 | 25941892 ~ 25949972 (+) | True | G187970 |
| XM_026909972.2 | mRNA | upstream | 72290 | 25188293 ~ 25199986 (+) | True | e2f8 |
| XM_026909971.2 | mRNA | upstream | 72290 | 25189477 ~ 25199986 (+) | False | e2f8 |
| XM_026910019.2 | mRNA | upstream | 101464 | 25158405 ~ 25170812 (+) | True | immp1l |
| XM_026910017.2 | mRNA | upstream | 101464 | 25158861 ~ 25170812 (+) | False | immp1l |
| XM_026910020.2 | mRNA | upstream | 101464 | 25158886 ~ 25170812 (+) | False | immp1l |
| XM_034308697.1 | mRNA | downstream | 85384 | 25357983 ~ 25383000 (+) | False | htatip2 |
| XM_026910002.2 | mRNA | downstream | 102961 | 25375560 ~ 25383000 (+) | False | htatip2 |
| XM_034308698.1 | mRNA | downstream | 103183 | 25375782 ~ 25383000 (+) | False | htatip2 |
| XM_026910003.2 | mRNA | downstream | 103250 | 25375849 ~ 25383000 (+) | True | htatip2 |
| XM_026910021.2 | mRNA | downstream | 114713 | 25387312 ~ 25448761 (+) | True | prmt3 |
| TU221326 | other | upstream | 1061551 | 24207893 ~ 24210725 (+) | True | glrx2 |
| TU221328 | other | upstream | 1061551 | 24207893 ~ 24210725 (+) | False | glrx2 |
| trnaq-uug_6 | other | upstream | 1325213 | 23946992 ~ 23947063 (+) | True | trnaq-uug_6 |
| trnaq-uug_5 | other | upstream | 1333388 | 23938817 ~ 23938888 (+) | True | trnaq-uug_5 |
| trnaq-cug_12 | other | upstream | 1333896 | 23938309 ~ 23938380 (+) | True | trnaq-cug_12 |
| trnar-acg_9 | other | downstream | 233824 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
| TU222375 | other | downstream | 259146 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
| TU222713 | other | downstream | 913263 | 26185862 ~ 26212109 (+) | False | polr2l |
| TU222716 | other | downstream | 934343 | 26206942 ~ 26210010 (+) | True | G188164 |
| TU222712 | other | downstream | 937960 | 26210559 ~ 26212109 (+) | False | polr2l |
