Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU222140 |
| length | 404 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G187675 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 25290513 ~ 25290974 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007229 | integrin-mediated signaling pathway | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222133 | lncRNA | upstream | 17914 | 25272276 ~ 25272599 (+) | True | G187668 |
| TU222076 | lncRNA | upstream | 114424 | 25175808 ~ 25176089 (+) | True | G187612 |
| TU222026 | lncRNA | upstream | 168398 | 25121247 ~ 25122115 (+) | True | G187563 |
| TU221986 | lncRNA | upstream | 302420 | 24987879 ~ 24988093 (+) | True | G187527 |
| TU221763 | lncRNA | upstream | 358467 | 24931645 ~ 24932046 (+) | True | G187340 |
| TU222258 | lncRNA | downstream | 54317 | 25345291 ~ 25345491 (+) | True | G187782 |
| TU222386 | lncRNA | downstream | 456136 | 25747110 ~ 25750632 (+) | True | G187895 |
| TU222471 | lncRNA | downstream | 627577 | 25918551 ~ 25919605 (+) | True | G187961 |
| TU222482 | lncRNA | downstream | 650918 | 25941892 ~ 25949972 (+) | True | G187970 |
| TU222672 | lncRNA | downstream | 697824 | 25988798 ~ 25993403 (+) | True | G188127 |
| XM_026909972.2 | mRNA | upstream | 90527 | 25188293 ~ 25199986 (+) | True | e2f8 |
| XM_026909971.2 | mRNA | upstream | 90527 | 25189477 ~ 25199986 (+) | False | e2f8 |
| XM_026910017.2 | mRNA | upstream | 119701 | 25158861 ~ 25170812 (+) | False | immp1l |
| XM_026910020.2 | mRNA | upstream | 119701 | 25158886 ~ 25170812 (+) | False | immp1l |
| XM_034308686.1 | mRNA | upstream | 122331 | 25158783 ~ 25168182 (+) | False | immp1l |
| XM_034308697.1 | mRNA | downstream | 67009 | 25357983 ~ 25383000 (+) | False | htatip2 |
| XM_026910002.2 | mRNA | downstream | 84586 | 25375560 ~ 25383000 (+) | False | htatip2 |
| XM_034308698.1 | mRNA | downstream | 84808 | 25375782 ~ 25383000 (+) | False | htatip2 |
| XM_026910003.2 | mRNA | downstream | 84875 | 25375849 ~ 25383000 (+) | True | htatip2 |
| XM_026910021.2 | mRNA | downstream | 96338 | 25387312 ~ 25448761 (+) | True | prmt3 |
| TU221326 | other | upstream | 1079788 | 24207893 ~ 24210725 (+) | True | glrx2 |
| TU221328 | other | upstream | 1079788 | 24207893 ~ 24210725 (+) | False | glrx2 |
| trnaq-uug_6 | other | upstream | 1343450 | 23946992 ~ 23947063 (+) | True | trnaq-uug_6 |
| trnaq-uug_5 | other | upstream | 1351625 | 23938817 ~ 23938888 (+) | True | trnaq-uug_5 |
| trnaq-cug_12 | other | upstream | 1352133 | 23938309 ~ 23938380 (+) | True | trnaq-cug_12 |
| trnar-acg_9 | other | downstream | 215449 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
| TU222375 | other | downstream | 240771 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
| TU222713 | other | downstream | 894888 | 26185862 ~ 26212109 (+) | False | polr2l |
| TU222716 | other | downstream | 915968 | 26206942 ~ 26210010 (+) | True | G188164 |
| TU222712 | other | downstream | 919585 | 26210559 ~ 26212109 (+) | False | polr2l |
