Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU222471 |
| length | 1055 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G187961 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 25918551 ~ 25919605 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222386 | lncRNA | upstream | 167919 | 25747110 ~ 25750632 (+) | True | G187895 |
| TU222258 | lncRNA | upstream | 573060 | 25345291 ~ 25345491 (+) | True | G187782 |
| TU222140 | lncRNA | upstream | 627577 | 25290513 ~ 25290974 (+) | True | G187675 |
| TU222133 | lncRNA | upstream | 645952 | 25272276 ~ 25272599 (+) | True | G187668 |
| TU222076 | lncRNA | upstream | 742462 | 25175808 ~ 25176089 (+) | True | G187612 |
| TU222482 | lncRNA | downstream | 22287 | 25941892 ~ 25949972 (+) | True | G187970 |
| TU222672 | lncRNA | downstream | 69193 | 25988798 ~ 25993403 (+) | True | G188127 |
| TU222720 | lncRNA | downstream | 190018 | 26109623 ~ 26109848 (+) | True | G188168 |
| TU222731 | lncRNA | downstream | 233924 | 26153529 ~ 26166792 (+) | True | G188179 |
| TU222738 | lncRNA | downstream | 241709 | 26161314 ~ 26164756 (+) | True | G188184 |
| XM_034308508.1 | mRNA | upstream | 221679 | 25531754 ~ 25696872 (+) | True | LOC113523924 |
| XM_034308509.1 | mRNA | upstream | 221679 | 25531754 ~ 25696872 (+) | False | LOC113523924 |
| XM_026910028.2 | mRNA | upstream | 433741 | 25455708 ~ 25484810 (+) | True | slc6a5 |
| XM_034308863.1 | mRNA | upstream | 433741 | 25456587 ~ 25484810 (+) | False | slc6a5 |
| XM_026910022.2 | mRNA | upstream | 487830 | 25387312 ~ 25430721 (+) | False | prmt3 |
| XM_026909993.2 | mRNA | downstream | 4575 | 25924180 ~ 25930589 (+) | True | tollip |
| XM_034308780.1 | mRNA | downstream | 119781 | 26039386 ~ 26062656 (+) | True | LOC113523928 |
| XM_034308692.1 | mRNA | downstream | 164052 | 26083657 ~ 26095138 (+) | True | slc38a7 |
| XM_034308615.1 | mRNA | downstream | 179919 | 26099524 ~ 26138619 (+) | False | helz2a |
| XM_026910023.2 | mRNA | downstream | 199803 | 26119408 ~ 26138619 (+) | True | helz2a |
| TU222375 | other | upstream | 325048 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
| trnar-acg_9 | other | upstream | 412056 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
| TU221326 | other | upstream | 1707826 | 24207893 ~ 24210725 (+) | True | glrx2 |
| TU221328 | other | upstream | 1707826 | 24207893 ~ 24210725 (+) | False | glrx2 |
| trnaq-uug_6 | other | upstream | 1971488 | 23946992 ~ 23947063 (+) | True | trnaq-uug_6 |
| TU222713 | other | downstream | 266257 | 26185862 ~ 26212109 (+) | False | polr2l |
| TU222716 | other | downstream | 287337 | 26206942 ~ 26210010 (+) | True | G188164 |
| TU222712 | other | downstream | 290954 | 26210559 ~ 26212109 (+) | False | polr2l |
| TU222884 | other | downstream | 341072 | 26260677 ~ 26318575 (+) | False | syt7b |
