Item | Value |
---|---|
RNA id | TU222672 |
length | 1067 |
lncRNA type | inter_gene |
GC content | 0.44 |
exon number | 2 |
gene id | G188127 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047605.1 |
NCBI id | CM018551.1 |
chromosome length | 26640196 |
location | 25988798 ~ 25993403 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU222482 | lncRNA | upstream | 38826 | 25941892 ~ 25949972 (+) | True | G187970 |
TU222471 | lncRNA | upstream | 69193 | 25918551 ~ 25919605 (+) | True | G187961 |
TU222386 | lncRNA | upstream | 238166 | 25747110 ~ 25750632 (+) | True | G187895 |
TU222258 | lncRNA | upstream | 643307 | 25345291 ~ 25345491 (+) | True | G187782 |
TU222140 | lncRNA | upstream | 697824 | 25290513 ~ 25290974 (+) | True | G187675 |
TU222720 | lncRNA | downstream | 116220 | 26109623 ~ 26109848 (+) | True | G188168 |
TU222731 | lncRNA | downstream | 160126 | 26153529 ~ 26166792 (+) | True | G188179 |
TU222738 | lncRNA | downstream | 167911 | 26161314 ~ 26164756 (+) | True | G188184 |
TU222739 | lncRNA | downstream | 168905 | 26162308 ~ 26164756 (+) | False | G188184 |
TU222764 | lncRNA | downstream | 225528 | 26218931 ~ 26222921 (+) | True | G188202 |
XM_026909993.2 | mRNA | upstream | 58209 | 25924180 ~ 25930589 (+) | True | tollip |
XM_034308508.1 | mRNA | upstream | 291926 | 25531754 ~ 25696872 (+) | True | LOC113523924 |
XM_034308509.1 | mRNA | upstream | 291926 | 25531754 ~ 25696872 (+) | False | LOC113523924 |
XM_026910028.2 | mRNA | upstream | 503988 | 25455708 ~ 25484810 (+) | True | slc6a5 |
XM_034308780.1 | mRNA | downstream | 45983 | 26039386 ~ 26062656 (+) | True | LOC113523928 |
XM_034308692.1 | mRNA | downstream | 90254 | 26083657 ~ 26095138 (+) | True | slc38a7 |
XM_034308615.1 | mRNA | downstream | 106121 | 26099524 ~ 26138619 (+) | False | helz2a |
XM_026910023.2 | mRNA | downstream | 126005 | 26119408 ~ 26138619 (+) | True | helz2a |
XM_026910854.2 | mRNA | downstream | 217145 | 26210548 ~ 26212115 (+) | True | polr2l |
TU222375 | other | upstream | 395295 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
trnar-acg_9 | other | upstream | 482303 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
TU221326 | other | upstream | 1778073 | 24207893 ~ 24210725 (+) | True | glrx2 |
TU221328 | other | upstream | 1778073 | 24207893 ~ 24210725 (+) | False | glrx2 |
trnaq-uug_6 | other | upstream | 2041735 | 23946992 ~ 23947063 (+) | True | trnaq-uug_6 |
TU222713 | other | downstream | 192459 | 26185862 ~ 26212109 (+) | False | polr2l |
TU222716 | other | downstream | 213539 | 26206942 ~ 26210010 (+) | True | G188164 |
TU222712 | other | downstream | 217156 | 26210559 ~ 26212109 (+) | False | polr2l |
TU222884 | other | downstream | 267274 | 26260677 ~ 26318575 (+) | False | syt7b |