Item | Value |
---|---|
RNA id | TU222738 |
length | 269 |
lncRNA type | inter_gene |
GC content | 0.45 |
exon number | 3 |
gene id | G188184 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047605.1 |
NCBI id | CM018551.1 |
chromosome length | 26640196 |
location | 26161314 ~ 26164756 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU222720 | lncRNA | upstream | 51466 | 26109623 ~ 26109848 (+) | True | G188168 |
TU222672 | lncRNA | upstream | 167911 | 25988798 ~ 25993403 (+) | True | G188127 |
TU222482 | lncRNA | upstream | 211342 | 25941892 ~ 25949972 (+) | True | G187970 |
TU222471 | lncRNA | upstream | 241709 | 25918551 ~ 25919605 (+) | True | G187961 |
TU222386 | lncRNA | upstream | 410682 | 25747110 ~ 25750632 (+) | True | G187895 |
TU222764 | lncRNA | downstream | 54175 | 26218931 ~ 26222921 (+) | True | G188202 |
TU222766 | lncRNA | downstream | 55679 | 26220435 ~ 26222921 (+) | False | G188202 |
XR_004579054.1 | lncRNA | downstream | 254850 | 26419606 ~ 26420373 (+) | True | LOC117598393 |
XR_004579058.1 | lncRNA | downstream | 255618 | 26420374 ~ 26421499 (+) | True | LOC117598395 |
TU223002 | lncRNA | downstream | 262612 | 26427368 ~ 26575308 (+) | False | G188395 |
XM_034308615.1 | mRNA | upstream | 22695 | 26099524 ~ 26138619 (+) | False | helz2a |
XM_026910023.2 | mRNA | upstream | 22695 | 26119408 ~ 26138619 (+) | True | helz2a |
XM_034308692.1 | mRNA | upstream | 66176 | 26083657 ~ 26095138 (+) | True | slc38a7 |
XM_034308780.1 | mRNA | upstream | 98658 | 26039386 ~ 26062656 (+) | True | LOC113523928 |
XM_026909993.2 | mRNA | upstream | 230725 | 25924180 ~ 25930589 (+) | True | tollip |
XM_026910854.2 | mRNA | downstream | 45792 | 26210548 ~ 26212115 (+) | True | polr2l |
XM_026910859.2 | mRNA | downstream | 59061 | 26223817 ~ 26227916 (+) | True | LOC113524556 |
XM_034308614.1 | mRNA | downstream | 76316 | 26241072 ~ 26244720 (+) | True | LOC117598406 |
XM_026910874.2 | mRNA | downstream | 95774 | 26260530 ~ 26352035 (+) | True | syt7b |
XM_026910875.2 | mRNA | downstream | 95775 | 26260531 ~ 26352035 (+) | False | syt7b |
TU222375 | other | upstream | 567811 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
trnar-acg_9 | other | upstream | 654819 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
TU221326 | other | upstream | 1950589 | 24207893 ~ 24210725 (+) | True | glrx2 |
TU221328 | other | upstream | 1950589 | 24207893 ~ 24210725 (+) | False | glrx2 |
trnaq-uug_6 | other | upstream | 2214251 | 23946992 ~ 23947063 (+) | True | trnaq-uug_6 |
TU222713 | other | downstream | 21106 | 26185862 ~ 26212109 (+) | False | polr2l |
TU222716 | other | downstream | 42186 | 26206942 ~ 26210010 (+) | True | G188164 |
TU222712 | other | downstream | 45803 | 26210559 ~ 26212109 (+) | False | polr2l |
TU222884 | other | downstream | 95921 | 26260677 ~ 26318575 (+) | False | syt7b |