Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308697.1 |
| length | 833 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 6 |
| gene id | htatip2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 25357983 ~ 25383000 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222258 | lncRNA | upstream | 12492 | 25345291 ~ 25345491 (+) | True | G187782 |
| TU222140 | lncRNA | upstream | 67009 | 25290513 ~ 25290974 (+) | True | G187675 |
| TU222133 | lncRNA | upstream | 85384 | 25272276 ~ 25272599 (+) | True | G187668 |
| TU222076 | lncRNA | upstream | 181894 | 25175808 ~ 25176089 (+) | True | G187612 |
| TU222026 | lncRNA | upstream | 235868 | 25121247 ~ 25122115 (+) | True | G187563 |
| TU222386 | lncRNA | downstream | 364110 | 25747110 ~ 25750632 (+) | True | G187895 |
| TU222471 | lncRNA | downstream | 535551 | 25918551 ~ 25919605 (+) | True | G187961 |
| TU222482 | lncRNA | downstream | 558892 | 25941892 ~ 25949972 (+) | True | G187970 |
| TU222672 | lncRNA | downstream | 605798 | 25988798 ~ 25993403 (+) | True | G188127 |
| TU222720 | lncRNA | downstream | 726623 | 26109623 ~ 26109848 (+) | True | G188168 |
| XM_026909983.2 | mRNA | upstream | 31329 | 25204119 ~ 25326654 (+) | False | nav2a |
| XM_026909982.2 | mRNA | upstream | 31329 | 25204124 ~ 25326654 (+) | True | nav2a |
| XM_026909988.2 | mRNA | upstream | 31329 | 25204154 ~ 25326654 (+) | False | nav2a |
| XM_026909984.2 | mRNA | upstream | 31329 | 25204256 ~ 25326654 (+) | False | nav2a |
| XM_026909985.2 | mRNA | upstream | 31329 | 25204358 ~ 25326654 (+) | False | nav2a |
| XM_026910021.2 | mRNA | downstream | 4312 | 25387312 ~ 25448761 (+) | True | prmt3 |
| XM_026910022.2 | mRNA | downstream | 4312 | 25387312 ~ 25430721 (+) | False | prmt3 |
| XM_026910028.2 | mRNA | downstream | 72708 | 25455708 ~ 25484810 (+) | True | slc6a5 |
| XM_034308863.1 | mRNA | downstream | 73587 | 25456587 ~ 25484810 (+) | False | slc6a5 |
| XM_034308508.1 | mRNA | downstream | 148754 | 25531754 ~ 25696872 (+) | True | LOC113523924 |
| TU221326 | other | upstream | 1147258 | 24207893 ~ 24210725 (+) | True | glrx2 |
| TU221328 | other | upstream | 1147258 | 24207893 ~ 24210725 (+) | False | glrx2 |
| trnaq-uug_6 | other | upstream | 1410920 | 23946992 ~ 23947063 (+) | True | trnaq-uug_6 |
| trnaq-uug_5 | other | upstream | 1419095 | 23938817 ~ 23938888 (+) | True | trnaq-uug_5 |
| trnaq-cug_12 | other | upstream | 1419603 | 23938309 ~ 23938380 (+) | True | trnaq-cug_12 |
| trnar-acg_9 | other | downstream | 123423 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
| TU222375 | other | downstream | 148745 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
| TU222713 | other | downstream | 802862 | 26185862 ~ 26212109 (+) | False | polr2l |
| TU222716 | other | downstream | 823942 | 26206942 ~ 26210010 (+) | True | G188164 |
| TU222712 | other | downstream | 827559 | 26210559 ~ 26212109 (+) | False | polr2l |
