Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308686.1 |
| length | 658 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | immp1l |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 25158405 ~ 25170812 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006627 | protein processing involved in protein targeting to mitochondrion | biological_process |
| GO:0006508 | proteolysis | biological_process |
| GO:0042720 | mitochondrial inner membrane peptidase complex | cellular_component |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222026 | lncRNA | upstream | 36668 | 25121247 ~ 25122115 (+) | True | G187563 |
| TU221986 | lncRNA | upstream | 170690 | 24987879 ~ 24988093 (+) | True | G187527 |
| TU221763 | lncRNA | upstream | 226737 | 24931645 ~ 24932046 (+) | True | G187340 |
| TU221673 | lncRNA | upstream | 352218 | 24803771 ~ 24806565 (+) | True | G187276 |
| TU221735 | lncRNA | upstream | 384597 | 24773765 ~ 24774186 (+) | True | G187316 |
| TU222076 | lncRNA | downstream | 7626 | 25175808 ~ 25176089 (+) | True | G187612 |
| TU222133 | lncRNA | downstream | 104094 | 25272276 ~ 25272599 (+) | True | G187668 |
| TU222140 | lncRNA | downstream | 122331 | 25290513 ~ 25290974 (+) | True | G187675 |
| TU222258 | lncRNA | downstream | 177109 | 25345291 ~ 25345491 (+) | True | G187782 |
| TU222386 | lncRNA | downstream | 578928 | 25747110 ~ 25750632 (+) | True | G187895 |
| XM_026947229.2 | mRNA | upstream | 174578 | 24950414 ~ 24984205 (+) | True | zdhhc13 |
| XM_026947178.2 | mRNA | upstream | 228040 | 24915616 ~ 24930743 (+) | True | rcn1 |
| XM_026947176.2 | mRNA | upstream | 245660 | 24831748 ~ 24913123 (+) | False | vps13c |
| XM_026947175.2 | mRNA | upstream | 247373 | 24809829 ~ 24911410 (+) | True | vps13c |
| XM_026909972.2 | mRNA | downstream | 20111 | 25188293 ~ 25199986 (+) | True | e2f8 |
| XM_026909971.2 | mRNA | downstream | 21295 | 25189477 ~ 25199986 (+) | False | e2f8 |
| XM_026909983.2 | mRNA | downstream | 35937 | 25204119 ~ 25326654 (+) | False | nav2a |
| XM_026909982.2 | mRNA | downstream | 35942 | 25204124 ~ 25326654 (+) | True | nav2a |
| XM_026909988.2 | mRNA | downstream | 35972 | 25204154 ~ 25326654 (+) | False | nav2a |
| TU221326 | other | upstream | 948058 | 24207893 ~ 24210725 (+) | True | glrx2 |
| TU221328 | other | upstream | 948058 | 24207893 ~ 24210725 (+) | False | glrx2 |
| trnaq-uug_6 | other | upstream | 1211720 | 23946992 ~ 23947063 (+) | True | trnaq-uug_6 |
| trnaq-uug_5 | other | upstream | 1219895 | 23938817 ~ 23938888 (+) | True | trnaq-uug_5 |
| trnaq-cug_12 | other | upstream | 1220403 | 23938309 ~ 23938380 (+) | True | trnaq-cug_12 |
| trnar-acg_9 | other | downstream | 338241 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
| TU222375 | other | downstream | 363563 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
| TU222713 | other | downstream | 1017680 | 26185862 ~ 26212109 (+) | False | polr2l |
| TU222716 | other | downstream | 1038760 | 26206942 ~ 26210010 (+) | True | G188164 |
| TU222712 | other | downstream | 1042377 | 26210559 ~ 26212109 (+) | False | polr2l |
