Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026924845.2 |
| length | 1307 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 4 |
| gene id | ccl44 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 19865798 ~ 19871463 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU218759 | lncRNA | upstream | 20998 | 19844047 ~ 19844800 (+) | False | LOC113534304 |
| TU218741 | lncRNA | upstream | 56544 | 19808713 ~ 19809254 (+) | True | G184823 |
| TU218615 | lncRNA | upstream | 161548 | 19703635 ~ 19704250 (+) | True | G184718 |
| TU218499 | lncRNA | upstream | 201307 | 19661092 ~ 19664491 (+) | True | G184617 |
| TU218481 | lncRNA | upstream | 310980 | 19553977 ~ 19554818 (+) | False | si:ch73-40i7.5 |
| TU218810 | lncRNA | downstream | 50008 | 19921471 ~ 19947483 (+) | True | G184882 |
| TU218828 | lncRNA | downstream | 83131 | 19954594 ~ 19955040 (+) | True | G184900 |
| TU218933 | lncRNA | downstream | 393473 | 20264936 ~ 20265620 (+) | True | G184988 |
| TU218932 | lncRNA | downstream | 394245 | 20265708 ~ 20320904 (+) | True | G184987 |
| TU218936 | lncRNA | downstream | 395136 | 20266599 ~ 20271344 (+) | True | LOC117598445 |
| XM_026925573.2 | mRNA | upstream | 5512 | 19854685 ~ 19860286 (+) | True | pole4 |
| XM_026927006.2 | mRNA | upstream | 20560 | 19836145 ~ 19845238 (+) | True | LOC113534304 |
| XM_034308398.1 | mRNA | upstream | 20560 | 19836145 ~ 19845238 (+) | False | LOC113534304 |
| XM_026926998.2 | mRNA | upstream | 20560 | 19836145 ~ 19845238 (+) | False | LOC113534304 |
| XM_034308399.1 | mRNA | upstream | 26471 | 19836145 ~ 19839327 (+) | False | LOC113534304 |
| XM_026929380.2 | mRNA | downstream | 32695 | 19904158 ~ 19911209 (+) | True | ctns |
| XM_026929071.2 | mRNA | downstream | 88238 | 19959701 ~ 19964557 (+) | True | LOC113535596 |
| XM_026926350.2 | mRNA | downstream | 98094 | 19969557 ~ 19971347 (+) | True | gadd45ba |
| XM_026920781.2 | mRNA | downstream | 205150 | 20076613 ~ 20103052 (+) | True | apc2 |
| XM_034308563.1 | mRNA | downstream | 234247 | 20105710 ~ 20120357 (+) | False | zgc:113223 |
| XR_004579107.1 | other | upstream | 31384 | 19827986 ~ 19834414 (+) | False | tax1bp3 |
| TU218602 | other | upstream | 165524 | 19695244 ~ 19700274 (+) | True | rps15 |
| TU218488 | other | upstream | 312276 | 19532081 ~ 19553522 (+) | False | si:ch73-40i7.5 |
| TU218486 | other | upstream | 312276 | 19550382 ~ 19553522 (+) | False | si:ch73-40i7.5 |
| TU218227 | other | upstream | 596576 | 19254957 ~ 19269222 (+) | False | adgrl4 |
| TU218923 | other | downstream | 278508 | 20149971 ~ 20150894 (+) | True | G184979 |
| XR_004579103.1 | other | downstream | 1318323 | 21189786 ~ 21210539 (+) | False | wipf2a |
| trnap-agg_1 | other | downstream | 2087425 | 21958888 ~ 21958959 (+) | True | trnap-agg_1 |
| trnaq-uug_2 | other | downstream | 4061403 | 23932866 ~ 23932937 (+) | True | trnaq-uug_2 |
| trnaq-cug_11 | other | downstream | 4062669 | 23934132 ~ 23934203 (+) | True | trnaq-cug_11 |
