Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026930276.2 |
| length | 1304 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | commd2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 17446400 ~ 17449781 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K22558 | COMMD2; COMM domain containing 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579106.1 | lncRNA | upstream | 23080 | 17416730 ~ 17423320 (+) | True | LOC113535983 |
| XR_003403652.2 | lncRNA | upstream | 23080 | 17416730 ~ 17423320 (+) | False | LOC113535983 |
| TU216612 | lncRNA | upstream | 23181 | 17416770 ~ 17423219 (+) | False | LOC113535983 |
| TU216605 | lncRNA | upstream | 34975 | 17408545 ~ 17411425 (+) | False | kcnh1b |
| TU216521 | lncRNA | upstream | 311401 | 17121913 ~ 17134999 (+) | False | si:ch211-126j24.1 |
| TU216632 | lncRNA | downstream | 676 | 17450457 ~ 17450736 (+) | True | G183032 |
| TU216676 | lncRNA | downstream | 127861 | 17577642 ~ 17583785 (+) | False | G183058 |
| TU216673 | lncRNA | downstream | 127959 | 17577740 ~ 17580114 (+) | True | G183058 |
| TU217213 | lncRNA | downstream | 274982 | 17724763 ~ 17725260 (+) | True | G183478 |
| TU217332 | lncRNA | downstream | 438346 | 17888127 ~ 17888353 (+) | True | G183566 |
| XM_026930164.2 | mRNA | upstream | 152 | 17439822 ~ 17446248 (+) | True | LOC113536271 |
| XM_026922364.2 | mRNA | upstream | 35074 | 17365698 ~ 17411326 (+) | True | kcnh1b |
| XM_026922372.2 | mRNA | upstream | 35074 | 17365698 ~ 17411326 (+) | False | kcnh1b |
| XM_026918740.2 | mRNA | upstream | 115150 | 17281249 ~ 17331250 (+) | True | mark1 |
| XM_026929441.2 | mRNA | upstream | 168945 | 17240492 ~ 17277455 (+) | True | ptk7a |
| XM_026919303.2 | mRNA | downstream | 4001 | 17453782 ~ 17497179 (+) | True | wwtr1 |
| XM_026919313.1 | mRNA | downstream | 4366 | 17454147 ~ 17494888 (+) | False | wwtr1 |
| XM_026917998.2 | mRNA | downstream | 57426 | 17507207 ~ 17532678 (+) | False | LOC113528887 |
| XM_034308402.1 | mRNA | downstream | 57444 | 17507225 ~ 17532678 (+) | False | LOC113528887 |
| XM_026917744.2 | mRNA | downstream | 59463 | 17509244 ~ 17532678 (+) | True | LOC113528887 |
| TU216628 | other | upstream | 1341 | 17439796 ~ 17445059 (+) | False | LOC113536271 |
| XR_003402991.2 | other | upstream | 230517 | 17196280 ~ 17215883 (+) | False | LOC113528769 |
| trnak-cuu_26 | other | upstream | 416456 | 17029872 ~ 17029944 (+) | True | trnak-cuu_26 |
| TU216450 | other | upstream | 523478 | 16913258 ~ 16922922 (+) | True | G182877 |
| TU216336 | other | upstream | 861457 | 16583303 ~ 16584943 (+) | True | G182819 |
| XR_004579126.1 | other | downstream | 148683 | 17598464 ~ 17636395 (+) | True | anos1b |
| XR_004579060.1 | other | downstream | 222390 | 17672171 ~ 17751502 (+) | True | mcf2l2 |
| XR_003403373.2 | other | downstream | 222390 | 17672171 ~ 17749291 (+) | False | mcf2l2 |
| TU217273 | other | downstream | 323932 | 17773713 ~ 17781813 (+) | False | ect2 |
| TU217312 | other | downstream | 345664 | 17795445 ~ 17796619 (+) | True | G183549 |
