Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308406.1 |
| length | 688 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 4 |
| gene id | LOC113536408 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 12484123 ~ 12487609 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU213207 | lncRNA | upstream | 60971 | 12422702 ~ 12423152 (+) | True | G180205 |
| TU213194 | lncRNA | upstream | 90632 | 12392887 ~ 12393491 (+) | True | G180192 |
| TU213141 | lncRNA | upstream | 297153 | 12181015 ~ 12186970 (+) | True | G180144 |
| TU213117 | lncRNA | upstream | 421213 | 12062559 ~ 12062910 (+) | True | G180132 |
| TU213107 | lncRNA | upstream | 430511 | 12053272 ~ 12053612 (+) | True | G180122 |
| TU213262 | lncRNA | downstream | 9122 | 12496731 ~ 12497651 (+) | True | G180246 |
| TU213271 | lncRNA | downstream | 56058 | 12543667 ~ 12561781 (+) | True | cdc14ab |
| TU213314 | lncRNA | downstream | 166187 | 12653796 ~ 12654215 (+) | True | G180267 |
| TU213315 | lncRNA | downstream | 166813 | 12654422 ~ 12682563 (+) | True | G180268 |
| TU213659 | lncRNA | downstream | 349259 | 12836868 ~ 12841282 (+) | True | G180516 |
| XM_034308405.1 | mRNA | upstream | 4354 | 12473933 ~ 12479769 (+) | False | trmt13 |
| XM_026930503.2 | mRNA | upstream | 4354 | 12473935 ~ 12479769 (+) | True | trmt13 |
| XM_026930463.2 | mRNA | upstream | 114346 | 12355995 ~ 12369777 (+) | False | sass6 |
| XM_026930462.2 | mRNA | upstream | 114346 | 12355997 ~ 12369777 (+) | True | sass6 |
| XM_026930478.2 | mRNA | upstream | 150442 | 12328052 ~ 12333681 (+) | True | timm13 |
| XM_026930321.2 | mRNA | downstream | 10242 | 12497851 ~ 12507903 (+) | True | rtca |
| XM_026930427.2 | mRNA | downstream | 25279 | 12512888 ~ 12559103 (+) | False | cdc14ab |
| XM_026930429.2 | mRNA | downstream | 25279 | 12512888 ~ 12559103 (+) | False | cdc14ab |
| XM_026930428.2 | mRNA | downstream | 25279 | 12512888 ~ 12559103 (+) | False | cdc14ab |
| XM_034308860.1 | mRNA | downstream | 77609 | 12565218 ~ 12566601 (+) | True | LOC117598419 |
| trnag-ucc_15 | other | upstream | 95882 | 12388170 ~ 12388241 (+) | True | trnag-ucc_15 |
| TU213163 | other | upstream | 150492 | 12328066 ~ 12333631 (+) | False | timm13 |
| TU213106 | other | upstream | 428374 | 12054958 ~ 12055749 (+) | True | G180121 |
| TU212683 | other | upstream | 1054784 | 11428613 ~ 11429339 (+) | False | G179758 |
| XR_003403710.1 | other | upstream | 1065880 | 11418114 ~ 11418243 (+) | True | LOC113536800 |
| TU213294 | other | downstream | 85584 | 12573193 ~ 12602064 (+) | False | LOC117598398 |
| TU213850 | other | downstream | 608764 | 13096373 ~ 13098156 (+) | False | ankmy1 |
| trnag-gcc_9 | other | downstream | 762761 | 13250370 ~ 13250441 (+) | True | trnag-gcc_9 |
| trnag-gcc_10 | other | downstream | 768448 | 13256057 ~ 13256124 (+) | True | trnag-gcc_10 |
| trnag-gcc_11 | other | downstream | 770399 | 13258008 ~ 13258076 (+) | True | trnag-gcc_11 |
