Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026930758.2 |
| length | 984 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 5 |
| gene id | tctex1d2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 10617812 ~ 10623164 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K22866 | TCTEX1D2; tctex1 domain-containing protein 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU212282 | lncRNA | upstream | 120100 | 10497488 ~ 10497712 (+) | True | G179428 |
| TU212281 | lncRNA | upstream | 120672 | 10496648 ~ 10497140 (+) | True | G179427 |
| TU212280 | lncRNA | upstream | 125343 | 10492033 ~ 10492469 (+) | True | G179426 |
| TU212279 | lncRNA | upstream | 126039 | 10486697 ~ 10491773 (+) | True | G179425 |
| TU212048 | lncRNA | upstream | 357204 | 10256766 ~ 10260608 (+) | True | G179212 |
| XR_003403698.2 | lncRNA | downstream | 159961 | 10783125 ~ 10784114 (+) | True | LOC113536738 |
| TU212443 | lncRNA | downstream | 181941 | 10805105 ~ 10805311 (+) | True | G179558 |
| TU212446 | lncRNA | downstream | 185872 | 10809036 ~ 10809271 (+) | True | G179561 |
| TU212441 | lncRNA | downstream | 207160 | 10830324 ~ 10850865 (+) | False | LOC113536516 |
| TU212457 | lncRNA | downstream | 240485 | 10863649 ~ 10863850 (+) | True | G179572 |
| XM_034308893.1 | mRNA | upstream | 38419 | 10565259 ~ 10579393 (+) | True | rubcn |
| XM_034308892.1 | mRNA | upstream | 54319 | 10555285 ~ 10563493 (+) | True | LOC113536420 |
| XM_026930793.2 | mRNA | upstream | 134201 | 10482171 ~ 10483611 (+) | True | cx36.7 |
| XM_034308925.1 | mRNA | upstream | 138489 | 10460121 ~ 10479323 (+) | True | lmnl3 |
| XM_034308924.1 | mRNA | upstream | 138489 | 10460121 ~ 10479323 (+) | False | lmnl3 |
| XM_026930894.2 | mRNA | downstream | 27094 | 10650258 ~ 10674052 (+) | True | LOC113536756 |
| XM_026930494.2 | mRNA | downstream | 187506 | 10810670 ~ 10850923 (+) | True | LOC113536516 |
| XM_026930495.2 | mRNA | downstream | 187506 | 10810670 ~ 10850923 (+) | False | LOC113536516 |
| XM_034308868.1 | mRNA | downstream | 490480 | 11113644 ~ 11160226 (+) | False | LOC113536667 |
| XM_026930764.2 | mRNA | downstream | 490481 | 11113645 ~ 11160226 (+) | True | LOC113536667 |
| TU210703 | other | upstream | 2347063 | 8253421 ~ 8270749 (+) | True | LOC113536578 |
| TU210704 | other | upstream | 2347063 | 8255867 ~ 8270749 (+) | False | LOC113536578 |
| trnar-ucg_8 | other | upstream | 2369724 | 8248016 ~ 8248088 (+) | True | trnar-ucg_8 |
| trnar-acg_6 | other | upstream | 2372788 | 8244952 ~ 8245024 (+) | True | trnar-acg_6 |
| trnar-ucg_6 | other | upstream | 2374318 | 8243422 ~ 8243494 (+) | False | trnar-ucg_6 |
| TU212529 | other | downstream | 472989 | 11096153 ~ 11098811 (+) | True | G179632 |
| TU212546 | other | downstream | 537182 | 11160346 ~ 11161125 (+) | False | G179643 |
| TU212545 | other | downstream | 537222 | 11160386 ~ 11161597 (+) | True | G179643 |
| TU212547 | other | downstream | 537222 | 11160386 ~ 11161217 (+) | False | G179643 |
| XR_003403700.1 | other | downstream | 788896 | 11412060 ~ 11412127 (+) | True | LOC113536790 |
