Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308470.1 |
| length | 843 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | LOC113538695 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 16247727 ~ 16249191 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008236 | serine-type peptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU215642 | lncRNA | upstream | 238492 | 16006054 ~ 16009235 (+) | True | G182190 |
| TU215562 | lncRNA | upstream | 257317 | 15988630 ~ 15990410 (+) | True | G182116 |
| TU215560 | lncRNA | upstream | 259746 | 15938100 ~ 15987981 (+) | True | G182115 |
| TU215618 | lncRNA | upstream | 354200 | 15893292 ~ 15893527 (+) | True | G182167 |
| TU215602 | lncRNA | upstream | 361902 | 15879531 ~ 15885825 (+) | True | G182152 |
| TU215985 | lncRNA | downstream | 10867 | 16260058 ~ 16260316 (+) | True | G182483 |
| XR_004579080.1 | lncRNA | downstream | 459434 | 16708625 ~ 16720748 (+) | False | LOC117598408 |
| TU216395 | lncRNA | downstream | 464522 | 16713713 ~ 16725527 (+) | True | LOC117598408 |
| XR_004579047.1 | lncRNA | downstream | 603217 | 16852408 ~ 16857137 (+) | True | LOC117598387 |
| TU216484 | lncRNA | downstream | 711468 | 16960659 ~ 16961299 (+) | True | G182906 |
| XM_026933795.2 | mRNA | upstream | 13890 | 16211346 ~ 16233837 (+) | False | LOC113538485 |
| XM_026933710.2 | mRNA | upstream | 13890 | 16211347 ~ 16233837 (+) | True | LOC113538485 |
| XM_026933882.2 | mRNA | upstream | 13890 | 16211357 ~ 16233837 (+) | False | LOC113538485 |
| XM_026933632.2 | mRNA | upstream | 13890 | 16229738 ~ 16233837 (+) | False | LOC113538485 |
| XM_026925078.2 | mRNA | upstream | 39907 | 16179542 ~ 16207820 (+) | True | fgf22 |
| XM_034308828.1 | mRNA | downstream | 5856 | 16255047 ~ 16256782 (+) | True | LOC113532318 |
| XM_026923653.2 | mRNA | downstream | 5856 | 16255047 ~ 16256782 (+) | False | LOC113532318 |
| XM_026925202.2 | mRNA | downstream | 23777 | 16272968 ~ 16275203 (+) | True | LOC113533225 |
| XM_026927435.2 | mRNA | downstream | 30788 | 16279979 ~ 16285280 (+) | True | hsd11b1la |
| XM_026930811.2 | mRNA | downstream | 72965 | 16322156 ~ 16328589 (+) | True | rgmd |
| XR_004579090.1 | other | upstream | 1536000 | 14708927 ~ 14711727 (+) | False | pdzk1ip1 |
| XR_004579085.1 | other | upstream | 1600905 | 14622543 ~ 14646822 (+) | True | si:dkey-121a11.3 |
| TU214729 | other | upstream | 1653112 | 14589919 ~ 14594615 (+) | False | ankrd29 |
| TU214656 | other | upstream | 1684761 | 14561690 ~ 14562966 (+) | False | LOC113540185 |
| TU214440 | other | upstream | 2073509 | 14165026 ~ 14174218 (+) | True | G181175 |
| TU215983 | other | downstream | 5872 | 16255063 ~ 16255852 (+) | False | LOC113532318 |
| XR_003403746.1 | other | downstream | 331045 | 16580236 ~ 16580303 (+) | True | LOC113537281 |
| TU216336 | other | downstream | 334112 | 16583303 ~ 16584943 (+) | True | G182819 |
| TU216450 | other | downstream | 664067 | 16913258 ~ 16922922 (+) | True | G182877 |
| trnak-cuu_26 | other | downstream | 780681 | 17029872 ~ 17029944 (+) | True | trnak-cuu_26 |
