Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026947277.2 |
| length | 1195 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 2 |
| gene id | LOC113547073 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 24461882 ~ 24470865 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU221284 | lncRNA | upstream | 258180 | 24153115 ~ 24203702 (+) | True | G186949 |
| TU221282 | lncRNA | upstream | 258180 | 24156602 ~ 24203702 (+) | False | G186949 |
| TU221283 | lncRNA | upstream | 258180 | 24157122 ~ 24203702 (+) | False | G186949 |
| TU221287 | lncRNA | upstream | 259316 | 24193341 ~ 24202566 (+) | True | G186950 |
| TU221319 | lncRNA | upstream | 275428 | 24161268 ~ 24186454 (+) | True | G186976 |
| TU221643 | lncRNA | downstream | 40807 | 24511672 ~ 24512168 (+) | True | G187257 |
| TU221647 | lncRNA | downstream | 54819 | 24525684 ~ 24549720 (+) | False | G187258 |
| TU221648 | lncRNA | downstream | 54819 | 24525684 ~ 24552314 (+) | True | G187258 |
| TU221640 | lncRNA | downstream | 92598 | 24563463 ~ 24568611 (+) | False | oaz1a |
| TU221659 | lncRNA | downstream | 104150 | 24575015 ~ 24576233 (+) | True | G187265 |
| XM_026947276.2 | mRNA | upstream | 80568 | 24338220 ~ 24381314 (+) | True | onecut3a |
| XM_026947280.2 | mRNA | upstream | 129212 | 24323165 ~ 24332670 (+) | True | LOC113547074 |
| XM_034308811.1 | mRNA | upstream | 142784 | 24275329 ~ 24319098 (+) | True | p3h2 |
| XM_026947274.2 | mRNA | upstream | 199135 | 24239832 ~ 24262747 (+) | False | ccdc50 |
| XM_026947226.2 | mRNA | downstream | 49477 | 24520342 ~ 24548207 (+) | True | dot1l |
| XM_026947228.2 | mRNA | downstream | 49477 | 24520342 ~ 24548207 (+) | False | dot1l |
| XM_034308661.1 | mRNA | downstream | 49477 | 24520342 ~ 24548207 (+) | False | dot1l |
| XM_026947292.2 | mRNA | downstream | 83796 | 24554661 ~ 24557994 (+) | False | amh |
| XM_026947294.2 | mRNA | downstream | 83797 | 24554662 ~ 24557994 (+) | False | amh |
| TU221326 | other | upstream | 251157 | 24207893 ~ 24210725 (+) | True | glrx2 |
| TU221328 | other | upstream | 251157 | 24207893 ~ 24210725 (+) | False | glrx2 |
| trnaq-uug_6 | other | upstream | 514819 | 23946992 ~ 23947063 (+) | True | trnaq-uug_6 |
| trnaq-uug_5 | other | upstream | 522994 | 23938817 ~ 23938888 (+) | True | trnaq-uug_5 |
| trnaq-cug_12 | other | upstream | 523502 | 23938309 ~ 23938380 (+) | True | trnaq-cug_12 |
| trnar-acg_9 | other | downstream | 1035558 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
| TU222375 | other | downstream | 1060880 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
| TU222713 | other | downstream | 1714997 | 26185862 ~ 26212109 (+) | False | polr2l |
| TU222716 | other | downstream | 1736077 | 26206942 ~ 26210010 (+) | True | G188164 |
| TU222712 | other | downstream | 1739694 | 26210559 ~ 26212109 (+) | False | polr2l |
