Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308416.1 |
| length | 1112 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 11 |
| gene id | psmd14 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 21532681 ~ 21552267 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0001878 | response to yeast | biological_process |
| GO:0000502 | proteasome complex | cellular_component |
| GO:0003984 | acetolactate synthase activity | molecular_function |
| id | description |
|---|---|
| K03030 | PSMD14, RPN11, POH1; 26S proteasome regulatory subunit N11 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU219622 | lncRNA | upstream | 44154 | 21488324 ~ 21488527 (+) | True | G185546 |
| TU219609 | lncRNA | upstream | 65743 | 21466332 ~ 21466938 (+) | True | G185533 |
| TU219589 | lncRNA | upstream | 86201 | 21444384 ~ 21446480 (+) | True | G185519 |
| TU219570 | lncRNA | upstream | 122889 | 21407479 ~ 21409792 (+) | True | G185503 |
| TU219569 | lncRNA | upstream | 128629 | 21395362 ~ 21404052 (+) | True | G185502 |
| TU219890 | lncRNA | downstream | 7900 | 21560167 ~ 21560379 (+) | True | G185751 |
| TU220105 | lncRNA | downstream | 468581 | 22020848 ~ 22021059 (+) | True | G185940 |
| TU220132 | lncRNA | downstream | 826626 | 22378893 ~ 22381003 (+) | False | pcdh17 |
| TU220165 | lncRNA | downstream | 829131 | 22381398 ~ 22381611 (+) | True | G185997 |
| TU220216 | lncRNA | downstream | 876591 | 22428858 ~ 22429104 (+) | True | G186046 |
| XM_034308765.1 | mRNA | upstream | 142475 | 21383873 ~ 21390206 (+) | True | lgsn |
| XM_026914590.2 | mRNA | upstream | 142475 | 21383874 ~ 21390206 (+) | False | lgsn |
| XM_034308764.1 | mRNA | upstream | 142475 | 21386972 ~ 21390206 (+) | False | lgsn |
| XM_026922435.2 | mRNA | upstream | 159310 | 21359474 ~ 21373371 (+) | True | col9a1a |
| XM_026930037.2 | mRNA | upstream | 181350 | 21346217 ~ 21351331 (+) | True | mrpl4 |
| XM_026914564.2 | mRNA | downstream | 2434 | 21554701 ~ 21559002 (+) | True | tbr1a |
| XM_026918527.2 | mRNA | downstream | 8788 | 21561055 ~ 21605914 (+) | False | slc4a10a |
| XM_026918518.2 | mRNA | downstream | 8790 | 21561057 ~ 21605913 (+) | False | slc4a10a |
| XM_026918535.2 | mRNA | downstream | 8790 | 21561057 ~ 21605913 (+) | False | slc4a10a |
| XM_026918544.2 | mRNA | downstream | 16270 | 21568537 ~ 21605913 (+) | True | slc4a10a |
| XR_004579103.1 | other | upstream | 322142 | 21189786 ~ 21210539 (+) | False | wipf2a |
| TU218923 | other | upstream | 1381787 | 20149971 ~ 20150894 (+) | True | G184979 |
| XR_003403385.2 | other | upstream | 1661218 | 19865798 ~ 19871463 (+) | True | ccl44 |
| XR_004579107.1 | other | upstream | 1698267 | 19827986 ~ 19834414 (+) | False | tax1bp3 |
| TU218602 | other | upstream | 1832407 | 19695244 ~ 19700274 (+) | True | rps15 |
| trnap-agg_1 | other | downstream | 406621 | 21958888 ~ 21958959 (+) | True | trnap-agg_1 |
| trnaq-uug_2 | other | downstream | 2380599 | 23932866 ~ 23932937 (+) | True | trnaq-uug_2 |
| trnaq-cug_11 | other | downstream | 2381865 | 23934132 ~ 23934203 (+) | True | trnaq-cug_11 |
| trnaq-uug_3 | other | downstream | 2382368 | 23934635 ~ 23934706 (+) | True | trnaq-uug_3 |
| trnaq-uug_4 | other | downstream | 2384750 | 23937017 ~ 23937088 (+) | True | trnaq-uug_4 |
