Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308528.1 |
| length | 1205 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | LOC117595669 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 19527046 ~ 19531687 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0016559 | peroxisome fission | biological_process |
| GO:0005779 | integral component of peroxisomal membrane | cellular_component |
| id | description |
|---|---|
| K13353 | PEX11C; peroxin-11C |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU218362 | lncRNA | upstream | 39268 | 19486372 ~ 19487778 (+) | False | smim7 |
| TU218363 | lncRNA | upstream | 39268 | 19486372 ~ 19487778 (+) | True | smim7 |
| TU218369 | lncRNA | upstream | 64203 | 19461824 ~ 19462843 (+) | True | G184503 |
| TU218370 | lncRNA | upstream | 65356 | 19459818 ~ 19461690 (+) | True | G184504 |
| TU218173 | lncRNA | upstream | 445561 | 19081252 ~ 19081485 (+) | True | G184340 |
| TU218491 | lncRNA | downstream | 16976 | 19548663 ~ 19602639 (+) | True | G184614 |
| TU218492 | lncRNA | downstream | 16976 | 19548663 ~ 19550326 (+) | False | G184614 |
| TU218481 | lncRNA | downstream | 22290 | 19553977 ~ 19554818 (+) | False | si:ch73-40i7.5 |
| TU218499 | lncRNA | downstream | 129405 | 19661092 ~ 19664491 (+) | True | G184617 |
| TU218615 | lncRNA | downstream | 171948 | 19703635 ~ 19704250 (+) | True | G184718 |
| XM_034308463.1 | mRNA | upstream | 2049 | 19509033 ~ 19524997 (+) | True | si:ch73-40i7.2 |
| XM_026929979.2 | mRNA | upstream | 21945 | 19498363 ~ 19505101 (+) | True | slc35e1 |
| XM_026928296.2 | mRNA | upstream | 31145 | 19490432 ~ 19495901 (+) | True | LOC113535100 |
| XM_026923920.2 | mRNA | upstream | 39262 | 19486328 ~ 19487784 (+) | False | smim7 |
| XM_034308396.1 | mRNA | upstream | 68872 | 19442164 ~ 19458174 (+) | False | crtc1b |
| XM_034308909.1 | mRNA | downstream | 11782 | 19543469 ~ 19548212 (+) | True | LOC113546543 |
| XM_034308397.1 | mRNA | downstream | 18959 | 19550646 ~ 19554969 (+) | True | si:ch73-40i7.5 |
| XM_026922544.2 | mRNA | downstream | 24025 | 19555712 ~ 19584739 (+) | True | zgc:172302 |
| XM_026922570.2 | mRNA | downstream | 55641 | 19587328 ~ 19597392 (+) | True | r3hdm4 |
| XM_026922559.2 | mRNA | downstream | 67576 | 19599263 ~ 19605614 (+) | True | LOC113531697 |
| TU218227 | other | upstream | 257824 | 19254957 ~ 19269222 (+) | False | adgrl4 |
| TU217312 | other | upstream | 1730427 | 17795445 ~ 17796619 (+) | True | G183549 |
| TU217273 | other | upstream | 1745233 | 17773713 ~ 17781813 (+) | False | ect2 |
| XR_004579060.1 | other | upstream | 1775544 | 17672171 ~ 17751502 (+) | True | mcf2l2 |
| TU218488 | other | downstream | 394 | 19532081 ~ 19553522 (+) | False | si:ch73-40i7.5 |
| TU218486 | other | downstream | 18695 | 19550382 ~ 19553522 (+) | False | si:ch73-40i7.5 |
| TU218602 | other | downstream | 163557 | 19695244 ~ 19700274 (+) | True | rps15 |
| XR_004579107.1 | other | downstream | 296299 | 19827986 ~ 19834414 (+) | False | tax1bp3 |
| XR_003403385.2 | other | downstream | 334111 | 19865798 ~ 19871463 (+) | True | ccl44 |
