Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308614.1 |
| length | 662 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 4 |
| gene id | LOC117598406 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 26241072 ~ 26244720 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006121 | mitochondrial electron transport, succinate to ubiquinone | biological_process |
| GO:0018293 | protein-FAD linkage | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| id | description |
|---|---|
| K18168 | SDHAF2, SDH5; succinate dehydrogenase assembly factor 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222764 | lncRNA | upstream | 18151 | 26218931 ~ 26222921 (+) | True | G188202 |
| TU222766 | lncRNA | upstream | 18151 | 26220435 ~ 26222921 (+) | False | G188202 |
| TU222731 | lncRNA | upstream | 74280 | 26153529 ~ 26166792 (+) | True | G188179 |
| XR_004579054.1 | lncRNA | downstream | 174886 | 26419606 ~ 26420373 (+) | True | LOC117598393 |
| XR_004579058.1 | lncRNA | downstream | 175654 | 26420374 ~ 26421499 (+) | True | LOC117598395 |
| TU223002 | lncRNA | downstream | 182648 | 26427368 ~ 26575308 (+) | False | G188395 |
| TU223004 | lncRNA | downstream | 182648 | 26427368 ~ 26575866 (+) | True | G188395 |
| XR_004579055.1 | lncRNA | downstream | 184415 | 26429135 ~ 26436719 (+) | True | LOC117598394 |
| XM_026910859.2 | mRNA | upstream | 13156 | 26223817 ~ 26227916 (+) | True | LOC113524556 |
| XM_026910854.2 | mRNA | upstream | 28957 | 26210548 ~ 26212115 (+) | True | polr2l |
| XM_034308615.1 | mRNA | upstream | 102453 | 26099524 ~ 26138619 (+) | False | helz2a |
| XM_026910023.2 | mRNA | upstream | 102453 | 26119408 ~ 26138619 (+) | True | helz2a |
| XM_034308692.1 | mRNA | upstream | 145934 | 26083657 ~ 26095138 (+) | True | slc38a7 |
| XM_026910874.2 | mRNA | downstream | 15810 | 26260530 ~ 26352035 (+) | True | syt7b |
| XM_026910875.2 | mRNA | downstream | 15811 | 26260531 ~ 26352035 (+) | False | syt7b |
| XM_026910876.2 | mRNA | downstream | 15812 | 26260532 ~ 26352035 (+) | False | syt7b |
| XM_026910877.2 | mRNA | downstream | 15813 | 26260533 ~ 26352035 (+) | False | syt7b |
| XM_034308579.1 | mRNA | downstream | 177193 | 26421913 ~ 26429101 (+) | True | LOC113524564 |
| TU222713 | other | upstream | 28963 | 26185862 ~ 26212109 (+) | False | polr2l |
| TU222712 | other | upstream | 28963 | 26210559 ~ 26212109 (+) | False | polr2l |
| TU222716 | other | upstream | 31062 | 26206942 ~ 26210010 (+) | True | G188164 |
| TU222375 | other | upstream | 647569 | 25531745 ~ 25593503 (+) | False | LOC113523924 |
| trnar-acg_9 | other | upstream | 734577 | 25506423 ~ 25506495 (+) | True | trnar-acg_9 |
| TU222884 | other | downstream | 15957 | 26260677 ~ 26318575 (+) | False | syt7b |
