Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308874.1 |
| length | 788 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 2 |
| gene id | sid1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 20716531 ~ 20717902 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU219189 | lncRNA | upstream | 8504 | 20705994 ~ 20708027 (+) | True | G185206 |
| TU219165 | lncRNA | upstream | 148239 | 20568076 ~ 20568292 (+) | True | G185182 |
| TU219046 | lncRNA | upstream | 161407 | 20554856 ~ 20555124 (+) | True | G185092 |
| TU219010 | lncRNA | upstream | 209851 | 20506477 ~ 20506680 (+) | True | G185063 |
| TU218982 | lncRNA | upstream | 279944 | 20435795 ~ 20436587 (+) | True | G185037 |
| TU219346 | lncRNA | downstream | 172345 | 20890247 ~ 20896461 (+) | True | G185330 |
| TU219404 | lncRNA | downstream | 246633 | 20964535 ~ 20967901 (+) | True | G185381 |
| TU219446 | lncRNA | downstream | 284926 | 21002828 ~ 21024560 (+) | True | G185418 |
| TU219472 | lncRNA | downstream | 341162 | 21059064 ~ 21060228 (+) | True | G185436 |
| TU219486 | lncRNA | downstream | 359273 | 21077175 ~ 21084699 (+) | False | G185439 |
| XM_026919781.2 | mRNA | upstream | 152599 | 20548259 ~ 20563932 (+) | True | tmem259 |
| XM_026922496.2 | mRNA | upstream | 535289 | 20171890 ~ 20181242 (+) | True | slc1a8a |
| XM_026920083.2 | mRNA | upstream | 546123 | 20163215 ~ 20170408 (+) | True | LOC113530255 |
| XM_026920096.2 | mRNA | upstream | 553486 | 20153984 ~ 20163045 (+) | True | sgta |
| XM_026926084.2 | mRNA | upstream | 595935 | 20115488 ~ 20120596 (+) | False | zgc:113223 |
| XM_034308861.1 | mRNA | downstream | 1529 | 20719431 ~ 20721806 (+) | True | si:ch211-1a19.2 |
| XM_034308487.1 | mRNA | downstream | 88429 | 20806331 ~ 20839589 (+) | False | mast3b |
| XM_034308489.1 | mRNA | downstream | 88429 | 20806331 ~ 20839589 (+) | False | mast3b |
| XM_034308490.1 | mRNA | downstream | 88429 | 20806331 ~ 20839589 (+) | False | mast3b |
| XM_034308491.1 | mRNA | downstream | 88430 | 20806332 ~ 20839589 (+) | False | mast3b |
| TU218923 | other | upstream | 565637 | 20149971 ~ 20150894 (+) | True | G184979 |
| XR_003403385.2 | other | upstream | 845068 | 19865798 ~ 19871463 (+) | True | ccl44 |
| XR_004579107.1 | other | upstream | 882117 | 19827986 ~ 19834414 (+) | False | tax1bp3 |
| TU218602 | other | upstream | 1016257 | 19695244 ~ 19700274 (+) | True | rps15 |
| TU218486 | other | upstream | 1163009 | 19550382 ~ 19553522 (+) | False | si:ch73-40i7.5 |
| XR_004579103.1 | other | downstream | 471884 | 21189786 ~ 21210539 (+) | False | wipf2a |
| trnap-agg_1 | other | downstream | 1240986 | 21958888 ~ 21958959 (+) | True | trnap-agg_1 |
| trnaq-uug_2 | other | downstream | 3214964 | 23932866 ~ 23932937 (+) | True | trnaq-uug_2 |
| trnaq-cug_11 | other | downstream | 3216230 | 23934132 ~ 23934203 (+) | True | trnaq-cug_11 |
| trnaq-uug_3 | other | downstream | 3216733 | 23934635 ~ 23934706 (+) | True | trnaq-uug_3 |
