Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU223110 |
| length | 268 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G188466 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 157512 ~ 182875 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579296.1 | lncRNA | upstream | 148997 | 8047 ~ 8515 (+) | True | LOC113537089 |
| XR_004579155.1 | lncRNA | downstream | 61048 | 243923 ~ 254748 (+) | True | LOC113535322 |
| XR_003403586.2 | lncRNA | downstream | 61048 | 243923 ~ 254748 (+) | False | LOC113535322 |
| TU223262 | lncRNA | downstream | 326155 | 509030 ~ 511976 (+) | False | G188605 |
| TU223264 | lncRNA | downstream | 326155 | 509030 ~ 511049 (+) | False | G188605 |
| TU223261 | lncRNA | downstream | 326545 | 509420 ~ 510163 (+) | True | G188605 |
| XM_026928597.2 | mRNA | upstream | 6058 | 139859 ~ 151454 (+) | True | si:ch211-207i20.2 |
| XM_026928598.2 | mRNA | upstream | 6061 | 139860 ~ 151451 (+) | False | si:ch211-207i20.2 |
| XM_026928418.2 | mRNA | upstream | 20724 | 134237 ~ 136788 (+) | True | LOC113535195 |
| XM_026928419.2 | mRNA | upstream | 20724 | 134237 ~ 136788 (+) | False | LOC113535195 |
| XM_034309262.1 | mRNA | upstream | 31673 | 121267 ~ 125839 (+) | True | LOC113535310 |
| XM_034309343.1 | mRNA | downstream | 91506 | 274381 ~ 275446 (+) | True | LOC117598554 |
| XM_026928112.2 | mRNA | downstream | 538176 | 721051 ~ 753040 (+) | True | btbd16 |
| XM_034309248.1 | mRNA | downstream | 538176 | 721051 ~ 753040 (+) | False | btbd16 |
| XM_026928113.2 | mRNA | downstream | 538176 | 721051 ~ 753040 (+) | False | btbd16 |
| XM_034309259.1 | mRNA | downstream | 579329 | 762204 ~ 784991 (+) | True | plekha1b |
| TU223925 | other | downstream | 1480217 | 1663092 ~ 1665337 (+) | False | LOC117598477 |
| TU224759 | other | downstream | 2577818 | 2760693 ~ 2761010 (+) | True | G189864 |
| TU224820 | other | downstream | 2787250 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224822 | other | downstream | 2787250 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224959 | other | downstream | 3055569 | 3238444 ~ 3239216 (+) | True | G190028 |
