Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU223617 |
| length | 480 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 3 |
| gene id | G188909 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 509031 ~ 511009 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU223615 | lncRNA | downstream | 360 | 506908 ~ 508671 (-) | True | G188908 |
| XR_003403575.2 | lncRNA | downstream | 369297 | 135208 ~ 139734 (-) | True | LOC113535197 |
| TU223629 | lncRNA | upstream | 22498 | 533507 ~ 534276 (-) | True | G188918 |
| TU223636 | lncRNA | upstream | 34615 | 545624 ~ 773583 (-) | True | G188923 |
| TU223672 | lncRNA | upstream | 125506 | 636515 ~ 636889 (-) | False | LOC117598518 |
| TU223648 | lncRNA | upstream | 180590 | 691599 ~ 784981 (-) | True | G188929 |
| TU223693 | lncRNA | upstream | 237729 | 748738 ~ 834576 (-) | False | c12h10orf88 |
| XM_034309344.1 | mRNA | upstream | 121994 | 633003 ~ 636382 (-) | True | LOC117598555 |
| XM_034309263.1 | mRNA | upstream | 125488 | 636497 ~ 638042 (-) | True | LOC117598518 |
| XM_034309226.1 | mRNA | upstream | 181939 | 692948 ~ 718933 (-) | True | waplb |
| XM_034309261.1 | mRNA | upstream | 317188 | 828197 ~ 834760 (-) | True | c12h10orf88 |
| XM_034309345.1 | mRNA | upstream | 357028 | 868037 ~ 879127 (-) | True | vps35l |
| TU223922 | other | upstream | 1053881 | 1564890 ~ 1565260 (-) | True | G189180 |
| TU223956 | other | upstream | 1057277 | 1568286 ~ 1571073 (-) | True | G189199 |
| XR_003404831.2 | other | upstream | 1683978 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU224780 | other | upstream | 2282037 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | upstream | 2289067 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
