Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU223925 |
| length | 721 |
| RNA type | TUCP |
| GC content | 0.31 |
| exon number | 3 |
| gene id | LOC117598477 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 1567516 ~ 1665813 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU223946 | lncRNA | upstream | 50872 | 1609826 ~ 1612220 (+) | True | G189190 |
| TU223911 | lncRNA | upstream | 116510 | 1545798 ~ 1546582 (+) | True | G189170 |
| TU223461 | lncRNA | upstream | 612472 | 1046500 ~ 1050620 (+) | True | G188770 |
| TU223448 | lncRNA | upstream | 687227 | 974797 ~ 975865 (+) | True | G188761 |
| TU223449 | lncRNA | upstream | 689233 | 972755 ~ 973859 (+) | False | LOC113535146 |
| TU224019 | lncRNA | downstream | 110268 | 1775605 ~ 1776432 (+) | True | G189245 |
| TU224061 | lncRNA | downstream | 197865 | 1863202 ~ 1863652 (+) | True | G189280 |
| TU224082 | lncRNA | downstream | 222313 | 1887650 ~ 1887870 (+) | True | G189293 |
| XR_004579220.1 | lncRNA | downstream | 258647 | 1923984 ~ 1925704 (+) | True | LOC117598584 |
| TU224074 | lncRNA | downstream | 258686 | 1924023 ~ 1925679 (+) | False | LOC117598584 |
| XM_026927863.2 | mRNA | upstream | 54195 | 1600541 ~ 1608897 (+) | True | klhl11 |
| XM_034309349.1 | mRNA | upstream | 60827 | 1579297 ~ 1602265 (+) | True | aclyb |
| XM_034309527.1 | mRNA | upstream | 97329 | 1564045 ~ 1565763 (+) | True | LOC117598650 |
| XM_026928539.2 | mRNA | upstream | 170881 | 1488171 ~ 1492211 (+) | True | LOC113535294 |
| XM_034309240.1 | mRNA | upstream | 207572 | 1404303 ~ 1455520 (+) | True | LOC113535212 |
| XM_034309396.1 | mRNA | downstream | 44612 | 1709949 ~ 1714497 (+) | True | LOC117598580 |
| XM_026928117.2 | mRNA | downstream | 173426 | 1838763 ~ 1844749 (+) | True | LOC113535035 |
| XM_034309399.1 | mRNA | downstream | 180891 | 1846228 ~ 1851194 (+) | True | LOC113535036 |
| XM_026928118.2 | mRNA | downstream | 182284 | 1847621 ~ 1851194 (+) | False | LOC113535036 |
| XM_034309398.1 | mRNA | downstream | 210317 | 1875654 ~ 1882978 (+) | False | foxh1 |
| XR_003403557.2 | other | upstream | 1442724 | 137521 ~ 220368 (+) | False | ccser2b |
| TU224759 | other | downstream | 1095356 | 2760693 ~ 2761010 (+) | True | G189864 |
| TU224820 | other | downstream | 1304788 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224822 | other | downstream | 1304788 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224959 | other | downstream | 1573107 | 3238444 ~ 3239216 (+) | True | G190028 |
| TU225191 | other | downstream | 1735930 | 3401267 ~ 3405009 (+) | True | G190212 |
