Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU223956 |
| length | 728 |
| RNA type | TUCP |
| GC content | 0.41 |
| exon number | 4 |
| gene id | G189199 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 1568286 ~ 1571073 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU223915 | lncRNA | downstream | 19564 | 1547696 ~ 1548722 (-) | True | G189174 |
| TU223899 | lncRNA | downstream | 34332 | 1453904 ~ 1533954 (-) | True | G189161 |
| TU223882 | lncRNA | downstream | 176365 | 1390363 ~ 1391921 (-) | True | G189149 |
| TU223885 | lncRNA | downstream | 176365 | 1390673 ~ 1391921 (-) | False | G189149 |
| TU223878 | lncRNA | downstream | 198236 | 1305166 ~ 1370050 (-) | True | G189145 |
| TU223969 | lncRNA | upstream | 15058 | 1586131 ~ 1588600 (-) | True | G189206 |
| TU223957 | lncRNA | upstream | 29369 | 1600442 ~ 1602249 (-) | True | G189200 |
| XR_004579218.1 | lncRNA | upstream | 129977 | 1701050 ~ 1701433 (-) | True | LOC117598583 |
| TU224004 | lncRNA | upstream | 136291 | 1707364 ~ 1707706 (-) | True | G189233 |
| TU224139 | lncRNA | upstream | 195659 | 1766732 ~ 1769695 (-) | False | LOC113534879 |
| XM_026928249.2 | mRNA | downstream | 495060 | 1065924 ~ 1073226 (-) | True | LOC113535098 |
| XM_034309225.1 | mRNA | downstream | 612445 | 944848 ~ 955841 (-) | True | LOC113535162 |
| XM_034309268.1 | mRNA | downstream | 624959 | 926188 ~ 943327 (-) | True | LOC113535267 |
| XM_034309267.1 | mRNA | downstream | 625201 | 926192 ~ 943085 (-) | False | LOC113535267 |
| XM_034309251.1 | mRNA | downstream | 679368 | 882694 ~ 888918 (-) | True | becn1 |
| XM_034309506.1 | mRNA | upstream | 42923 | 1613996 ~ 1619414 (-) | True | LOC113535205 |
| XM_034309198.1 | mRNA | upstream | 51607 | 1622680 ~ 1650547 (-) | True | LOC117598490 |
| XM_026927851.2 | mRNA | upstream | 189761 | 1760834 ~ 1773520 (-) | True | LOC113534879 |
| XM_026927853.2 | mRNA | upstream | 189761 | 1760834 ~ 1773517 (-) | False | LOC113534879 |
| XM_026927852.2 | mRNA | upstream | 189761 | 1760834 ~ 1772413 (-) | False | LOC113534879 |
| TU223922 | other | downstream | 3026 | 1564890 ~ 1565260 (-) | True | G189180 |
| XR_003404831.2 | other | upstream | 623914 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU224780 | other | upstream | 1221973 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | upstream | 1229003 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| TU224811 | other | upstream | 1280982 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| trnap-cgg_2 | other | upstream | 3327701 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
