Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224061 |
| length | 451 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G189280 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 1863202 ~ 1863652 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224019 | lncRNA | upstream | 86770 | 1775605 ~ 1776432 (+) | True | G189245 |
| XR_004579144.1 | lncRNA | upstream | 197389 | 1663097 ~ 1665813 (+) | True | LOC117598477 |
| TU223926 | lncRNA | upstream | 197865 | 1567516 ~ 1665337 (+) | False | LOC117598477 |
| TU223946 | lncRNA | upstream | 250982 | 1609826 ~ 1612220 (+) | True | G189190 |
| TU223911 | lncRNA | upstream | 316620 | 1545798 ~ 1546582 (+) | True | G189170 |
| TU224082 | lncRNA | downstream | 23998 | 1887650 ~ 1887870 (+) | True | G189293 |
| XR_004579220.1 | lncRNA | downstream | 60332 | 1923984 ~ 1925704 (+) | True | LOC117598584 |
| TU224074 | lncRNA | downstream | 60371 | 1924023 ~ 1925679 (+) | False | LOC117598584 |
| TU224099 | lncRNA | downstream | 76300 | 1939952 ~ 1940256 (+) | False | LOC117598558 |
| TU224296 | lncRNA | downstream | 279500 | 2143152 ~ 2145756 (+) | True | G189477 |
| XM_034309399.1 | mRNA | upstream | 12008 | 1846228 ~ 1851194 (+) | True | LOC113535036 |
| XM_026928118.2 | mRNA | upstream | 12008 | 1847621 ~ 1851194 (+) | False | LOC113535036 |
| XM_026928117.2 | mRNA | upstream | 18453 | 1838763 ~ 1844749 (+) | True | LOC113535035 |
| XM_034309396.1 | mRNA | upstream | 148705 | 1709949 ~ 1714497 (+) | True | LOC117598580 |
| XM_026927863.2 | mRNA | upstream | 254305 | 1600541 ~ 1608897 (+) | True | klhl11 |
| XM_034309398.1 | mRNA | downstream | 12002 | 1875654 ~ 1882978 (+) | False | foxh1 |
| XM_026928452.2 | mRNA | downstream | 12003 | 1875655 ~ 1882978 (+) | True | foxh1 |
| XM_026928621.2 | mRNA | downstream | 41556 | 1905208 ~ 1919420 (+) | True | stat5b |
| XM_026928622.2 | mRNA | downstream | 41556 | 1905208 ~ 1919420 (+) | False | stat5b |
| XM_034309388.1 | mRNA | downstream | 62747 | 1926399 ~ 1934902 (+) | False | ghdc |
| TU223925 | other | upstream | 197865 | 1663092 ~ 1665337 (+) | False | LOC117598477 |
| XR_003403557.2 | other | upstream | 1642834 | 137521 ~ 220368 (+) | False | ccser2b |
| TU224759 | other | downstream | 897041 | 2760693 ~ 2761010 (+) | True | G189864 |
| TU224820 | other | downstream | 1106473 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224822 | other | downstream | 1106473 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224959 | other | downstream | 1374792 | 3238444 ~ 3239216 (+) | True | G190028 |
| TU225191 | other | downstream | 1537615 | 3401267 ~ 3405009 (+) | True | G190212 |
