Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224263 |
| length | 519 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 3 |
| gene id | G189451 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2048830 ~ 2061265 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224223 | lncRNA | downstream | 58675 | 1989519 ~ 1990155 (-) | True | G189412 |
| TU224220 | lncRNA | downstream | 60599 | 1987335 ~ 1988231 (-) | True | G189411 |
| TU224192 | lncRNA | downstream | 123129 | 1924026 ~ 1925701 (-) | True | G189388 |
| TU224194 | lncRNA | downstream | 123129 | 1924026 ~ 1925701 (-) | False | G189388 |
| TU224190 | lncRNA | downstream | 125463 | 1919470 ~ 1923367 (-) | True | G189386 |
| TU224331 | lncRNA | upstream | 85447 | 2146712 ~ 2146915 (-) | True | G189512 |
| TU224340 | lncRNA | upstream | 99365 | 2160630 ~ 2162571 (-) | True | G189521 |
| TU224375 | lncRNA | upstream | 219281 | 2280546 ~ 2280753 (-) | True | G189547 |
| TU224575 | lncRNA | upstream | 332761 | 2394026 ~ 2399476 (-) | True | G189702 |
| TU224592 | lncRNA | upstream | 529972 | 2591237 ~ 2609773 (-) | False | smarcd2 |
| XM_026928444.2 | mRNA | downstream | 65953 | 1941696 ~ 1982877 (-) | True | kcnh4b |
| XM_034309383.1 | mRNA | downstream | 144834 | 1888816 ~ 1903996 (-) | False | oplah |
| XM_034309382.1 | mRNA | downstream | 146070 | 1888816 ~ 1902760 (-) | False | oplah |
| XM_034309381.1 | mRNA | downstream | 146071 | 1888816 ~ 1902759 (-) | True | oplah |
| XM_026928116.2 | mRNA | downstream | 178837 | 1825038 ~ 1869993 (-) | True | ppp1r16a |
| XM_034309385.1 | mRNA | upstream | 57937 | 2119202 ~ 2123272 (-) | False | buc2l |
| XM_026928003.2 | mRNA | upstream | 57937 | 2119202 ~ 2123272 (-) | False | buc2l |
| XM_026928002.2 | mRNA | upstream | 57937 | 2119202 ~ 2123272 (-) | True | buc2l |
| XM_026928000.2 | mRNA | upstream | 63470 | 2124735 ~ 2132242 (-) | False | LOC113534974 |
| XM_034309391.1 | mRNA | upstream | 63470 | 2124735 ~ 2131470 (-) | True | LOC113534974 |
| TU223956 | other | downstream | 477757 | 1568286 ~ 1571073 (-) | True | G189199 |
| TU223922 | other | downstream | 483570 | 1564890 ~ 1565260 (-) | True | G189180 |
| XR_003404831.2 | other | upstream | 133722 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU224780 | other | upstream | 731781 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | upstream | 738811 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| TU224811 | other | upstream | 790790 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| trnap-cgg_2 | other | upstream | 2837509 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
