Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224331 |
| length | 204 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G189512 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2146712 ~ 2146915 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224263 | lncRNA | downstream | 85447 | 2048830 ~ 2061265 (-) | False | G189451 |
| TU224262 | lncRNA | downstream | 97294 | 2048830 ~ 2049418 (-) | True | G189451 |
| TU224223 | lncRNA | downstream | 156557 | 1989519 ~ 1990155 (-) | True | G189412 |
| TU224220 | lncRNA | downstream | 158481 | 1987335 ~ 1988231 (-) | True | G189411 |
| TU224192 | lncRNA | downstream | 221011 | 1924026 ~ 1925701 (-) | True | G189388 |
| TU224340 | lncRNA | upstream | 13715 | 2160630 ~ 2162571 (-) | True | G189521 |
| TU224375 | lncRNA | upstream | 133631 | 2280546 ~ 2280753 (-) | True | G189547 |
| TU224575 | lncRNA | upstream | 247111 | 2394026 ~ 2399476 (-) | True | G189702 |
| TU224592 | lncRNA | upstream | 444322 | 2591237 ~ 2609773 (-) | False | smarcd2 |
| TU224598 | lncRNA | upstream | 456278 | 2603193 ~ 2604096 (-) | True | G189717 |
| XM_026928000.2 | mRNA | downstream | 14470 | 2124735 ~ 2132242 (-) | False | LOC113534974 |
| XM_034309391.1 | mRNA | downstream | 15242 | 2124735 ~ 2131470 (-) | True | LOC113534974 |
| XM_034309385.1 | mRNA | downstream | 23440 | 2119202 ~ 2123272 (-) | False | buc2l |
| XM_026928003.2 | mRNA | downstream | 23440 | 2119202 ~ 2123272 (-) | False | buc2l |
| XM_026928002.2 | mRNA | downstream | 23440 | 2119202 ~ 2123272 (-) | True | buc2l |
| XM_034309400.1 | mRNA | upstream | 19511 | 2166426 ~ 2171691 (-) | True | psme2 |
| XM_026947855.2 | mRNA | upstream | 47429 | 2194344 ~ 2210979 (-) | True | LOC113547489 |
| XM_034309386.1 | mRNA | upstream | 47429 | 2194344 ~ 2210952 (-) | False | LOC113547489 |
| XM_026947891.2 | mRNA | upstream | 68486 | 2215401 ~ 2224300 (-) | False | emc9 |
| XM_026947892.2 | mRNA | upstream | 68486 | 2215401 ~ 2224300 (-) | True | emc9 |
| TU223956 | other | downstream | 575639 | 1568286 ~ 1571073 (-) | True | G189199 |
| TU223922 | other | downstream | 581452 | 1564890 ~ 1565260 (-) | True | G189180 |
| XR_003404831.2 | other | upstream | 48072 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU224780 | other | upstream | 646131 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | upstream | 653161 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| TU224811 | other | upstream | 705140 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| trnap-cgg_2 | other | upstream | 2751859 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
