Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224375 |
| length | 208 |
| lncRNA type | inter_gene |
| GC content | 0.61 |
| exon number | 1 |
| gene id | G189547 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2280546 ~ 2280753 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224340 | lncRNA | downstream | 117975 | 2160630 ~ 2162571 (-) | True | G189521 |
| TU224331 | lncRNA | downstream | 133631 | 2146712 ~ 2146915 (-) | True | G189512 |
| TU224263 | lncRNA | downstream | 219281 | 2048830 ~ 2061265 (-) | False | G189451 |
| TU224262 | lncRNA | downstream | 231128 | 2048830 ~ 2049418 (-) | True | G189451 |
| TU224223 | lncRNA | downstream | 290391 | 1989519 ~ 1990155 (-) | True | G189412 |
| TU224575 | lncRNA | upstream | 113273 | 2394026 ~ 2399476 (-) | True | G189702 |
| TU224592 | lncRNA | upstream | 310484 | 2591237 ~ 2609773 (-) | False | smarcd2 |
| TU224598 | lncRNA | upstream | 322440 | 2603193 ~ 2604096 (-) | True | G189717 |
| TU224599 | lncRNA | upstream | 322440 | 2603193 ~ 2604043 (-) | False | G189717 |
| TU224700 | lncRNA | upstream | 374550 | 2655303 ~ 2655507 (-) | True | G189810 |
| XM_034309487.1 | mRNA | downstream | 11491 | 2245794 ~ 2269055 (-) | False | LOC117598634 |
| XM_034309486.1 | mRNA | downstream | 11491 | 2245794 ~ 2269055 (-) | True | LOC117598634 |
| XM_034309553.1 | mRNA | downstream | 34831 | 2243875 ~ 2245715 (-) | True | LOC117598663 |
| XM_026947891.2 | mRNA | downstream | 56246 | 2215401 ~ 2224300 (-) | False | emc9 |
| XM_026947892.2 | mRNA | downstream | 56246 | 2215401 ~ 2224300 (-) | True | emc9 |
| XM_034309549.1 | mRNA | upstream | 27488 | 2308241 ~ 2334652 (-) | True | med24 |
| XM_034309128.1 | mRNA | upstream | 54880 | 2335633 ~ 2345673 (-) | False | samd14 |
| XM_034309127.1 | mRNA | upstream | 54881 | 2335634 ~ 2345673 (-) | True | samd14 |
| XM_026947903.2 | mRNA | upstream | 81071 | 2361824 ~ 2363285 (-) | True | LOC113547524 |
| XM_026947813.2 | mRNA | upstream | 303028 | 2583781 ~ 2590145 (-) | False | psmc5 |
| XR_003404831.2 | other | downstream | 69567 | 2194987 ~ 2210979 (-) | False | LOC113547489 |
| TU223956 | other | downstream | 709473 | 1568286 ~ 1571073 (-) | True | G189199 |
| TU223922 | other | downstream | 715286 | 1564890 ~ 1565260 (-) | True | G189180 |
| TU224780 | other | upstream | 512293 | 2793046 ~ 2814580 (-) | False | LOC117598559 |
| TU224784 | other | upstream | 519323 | 2800076 ~ 2805906 (-) | False | LOC113547504 |
| TU224811 | other | upstream | 571302 | 2852055 ~ 2855493 (-) | True | ndufa4 |
| trnap-cgg_2 | other | upstream | 2618021 | 4898774 ~ 4898845 (-) | True | trnap-cgg_2 |
| trnap-agg_2 | other | upstream | 2619213 | 4899966 ~ 4900037 (-) | True | trnap-agg_2 |
