Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224386 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G189555 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2295086 ~ 2295305 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224296 | lncRNA | upstream | 149330 | 2143152 ~ 2145756 (+) | True | G189477 |
| TU224099 | lncRNA | upstream | 354830 | 1939952 ~ 1940256 (+) | False | LOC117598558 |
| XR_004579220.1 | lncRNA | upstream | 369382 | 1923984 ~ 1925704 (+) | True | LOC117598584 |
| TU224074 | lncRNA | upstream | 369407 | 1924023 ~ 1925679 (+) | False | LOC117598584 |
| TU224082 | lncRNA | upstream | 407216 | 1887650 ~ 1887870 (+) | True | G189293 |
| TU224394 | lncRNA | downstream | 12921 | 2308226 ~ 2309418 (+) | True | G189563 |
| TU224401 | lncRNA | downstream | 22013 | 2317318 ~ 2318307 (+) | True | G189570 |
| TU224528 | lncRNA | downstream | 229751 | 2525056 ~ 2528820 (+) | True | pyyb |
| TU224489 | lncRNA | downstream | 295933 | 2591238 ~ 2609497 (+) | True | G189626 |
| TU224549 | lncRNA | downstream | 310578 | 2605883 ~ 2608078 (+) | True | G189678 |
| XM_034309182.1 | mRNA | upstream | 8032 | 2270632 ~ 2287054 (+) | False | lrrc3ca |
| XM_026947884.2 | mRNA | upstream | 8032 | 2280510 ~ 2287054 (+) | True | lrrc3ca |
| XM_026947886.2 | mRNA | upstream | 8032 | 2283308 ~ 2287054 (+) | False | lrrc3ca |
| XM_034309183.1 | mRNA | upstream | 8032 | 2285069 ~ 2287054 (+) | False | lrrc3ca |
| XM_026947887.2 | mRNA | upstream | 110888 | 2173539 ~ 2184198 (+) | True | irf9 |
| XM_026947910.2 | mRNA | downstream | 6928 | 2302233 ~ 2304287 (+) | True | LOC113547531 |
| XM_034309548.1 | mRNA | downstream | 51740 | 2347045 ~ 2361095 (+) | True | top2a |
| XM_034309547.1 | mRNA | downstream | 51740 | 2347045 ~ 2361095 (+) | False | top2a |
| XM_026947897.2 | mRNA | downstream | 98771 | 2394076 ~ 2486796 (+) | True | raraa |
| XM_026947899.2 | mRNA | downstream | 171353 | 2466658 ~ 2486796 (+) | False | raraa |
| TU223925 | other | upstream | 629749 | 1663092 ~ 1665337 (+) | False | LOC117598477 |
| XR_003403557.2 | other | upstream | 2074718 | 137521 ~ 220368 (+) | False | ccser2b |
| TU224759 | other | downstream | 465388 | 2760693 ~ 2761010 (+) | True | G189864 |
| TU224820 | other | downstream | 674820 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224822 | other | downstream | 674820 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224959 | other | downstream | 943139 | 3238444 ~ 3239216 (+) | True | G190028 |
| TU225191 | other | downstream | 1105962 | 3401267 ~ 3405009 (+) | True | G190212 |
