Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU224401 |
| length | 438 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 2 |
| gene id | G189570 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 2317318 ~ 2318307 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU224394 | lncRNA | upstream | 7900 | 2308226 ~ 2309418 (+) | True | G189563 |
| TU224386 | lncRNA | upstream | 22013 | 2295086 ~ 2295305 (+) | True | G189555 |
| TU224296 | lncRNA | upstream | 171562 | 2143152 ~ 2145756 (+) | True | G189477 |
| TU224099 | lncRNA | upstream | 377062 | 1939952 ~ 1940256 (+) | False | LOC117598558 |
| XR_004579220.1 | lncRNA | upstream | 391614 | 1923984 ~ 1925704 (+) | True | LOC117598584 |
| TU224528 | lncRNA | downstream | 206749 | 2525056 ~ 2528820 (+) | True | pyyb |
| TU224489 | lncRNA | downstream | 272931 | 2591238 ~ 2609497 (+) | True | G189626 |
| TU224549 | lncRNA | downstream | 287576 | 2605883 ~ 2608078 (+) | True | G189678 |
| TU224557 | lncRNA | downstream | 296390 | 2614697 ~ 2615755 (+) | True | G189684 |
| XR_003404829.2 | lncRNA | downstream | 323534 | 2641841 ~ 2644184 (+) | True | LOC113547470 |
| XM_026947910.2 | mRNA | upstream | 13031 | 2302233 ~ 2304287 (+) | True | LOC113547531 |
| XM_034309182.1 | mRNA | upstream | 30264 | 2270632 ~ 2287054 (+) | False | lrrc3ca |
| XM_034309548.1 | mRNA | downstream | 28738 | 2347045 ~ 2361095 (+) | True | top2a |
| XM_034309547.1 | mRNA | downstream | 28738 | 2347045 ~ 2361095 (+) | False | top2a |
| XM_026947897.2 | mRNA | downstream | 75769 | 2394076 ~ 2486796 (+) | True | raraa |
| XM_026947899.2 | mRNA | downstream | 148351 | 2466658 ~ 2486796 (+) | False | raraa |
| XM_034309326.1 | mRNA | downstream | 171502 | 2489809 ~ 2502830 (+) | True | mki67 |
| TU223925 | other | upstream | 651981 | 1663092 ~ 1665337 (+) | False | LOC117598477 |
| XR_003403557.2 | other | upstream | 2096950 | 137521 ~ 220368 (+) | False | ccser2b |
| TU224759 | other | downstream | 442386 | 2760693 ~ 2761010 (+) | True | G189864 |
| TU224820 | other | downstream | 651818 | 2970125 ~ 2989928 (+) | False | LOC113547538 |
| TU224822 | other | downstream | 651818 | 2970125 ~ 3021609 (+) | False | LOC113547538 |
| TU224959 | other | downstream | 920137 | 3238444 ~ 3239216 (+) | True | G190028 |
| TU225191 | other | downstream | 1082960 | 3401267 ~ 3405009 (+) | True | G190212 |
